Click here to switch to the map view.

The map label for this gene is 89054420

Identifier: 89054420

GI number: 89054420

Start: 1917140

End: 1918084

Strand: Direct

Name: 89054420

Synonym: Jann_1929

Alternate gene names: NA

Gene position: 1917140-1918084 (Clockwise)

Preceding gene: 89054419

Following gene: 89054421

Centisome position: 44.4

GC content: 70.9

Gene sequence:

>945_bases
ATGGTGGGCGCGGCTGTCGCGCTGGTCGCGGCGGGCCTGGGCTTCTGGCTTTCGGGCGGGGACCGTTTGGTGACGGCCTG
GGCGCTGGATGGGCAGAGAGAGGCCCAGGGGGCCATGGCGGGCGCGCTGCGCCGCTTGCGCGCGGGGGAGGCGGCGGCGG
TCGCCTCGCTCATGATTGTGTGTTTCGGCTACGGGTTCTTTCACGCGGTGGGCCCGGGCCACGGCAAGCTGTTGATCGGC
GGTTATGGCGCGGCGCGAGAGGTGGGGGCCGTGCGGCTCTCGGCTGTGGCGTTGGCCTCCAGCCTGGCCCAGGGGCTGAC
GGCGGTGATGCTGGTGGGGGCGGGGGTCTGGCTGATCGGCTGGGGGCGGGAGCGAATGACGCAGATGGCCGATCAGGTCT
TCGCGCCGCTGAGTTTCGCGGCGATTGCGCTTGTGGGCCTGTGGCTGGTCTGGCGTGGGGCGCGAGGGCTTTGGCGATTG
CAGCGGATCGCGGCCCACGACCATGACCATGACCATCACCCCCATGACCATGACCATGACCACGACCACGGTCATGGCCA
CGGGGACGACGGGGCGGTTTGCGGCAGCTGTGGCCATTCCCACGGTCCAAGCGCCGAGGCGGTTGCCCGCGCGGCGGGTC
CAAGGGAGGTCGCGGCCCTGATCGCGGCGGTGGCCATCCGTCCCTGCACCGGCGCGCTGTTTGTCCTGATCCTCACGGCC
CAGATGGGCGTGTTCTGGGCGGGTGTGCTGGGCACATTGGCCATGGCGCTTGGCACCGCGAGCGTGACCATCCTGGTGGC
GGTGGCCGCCGTCGGGCTGCGGCGCAGTGCGCTGGCGGGTTTGGCCGACAGCCCGATATTGGCGCGGGCGCAACCGATCC
TGGAGCTTGCCGTGGGGGCCTTGGTCGCGGTGCTGGCCACACACCTTGCTTTGGCCGCATTGTAG

Upstream 100 bases:

>100_bases
CCGCGTTGGACGCCATCGGTGGCGTGATCGCGGCGGAGGATAATTTTCCGCGAGTGGGCGGGCTGTTCGCGGACCGGGTG
GTGTTTGAATGCGCTGGCTG

Downstream 100 bases:

>100_bases
CGGGCCGGGCGCCAGTCTCCGCCTCGGACATCGCCCCGAAGGGCGATATGCCTCGCCGGACCACGCGCCGTGGGCGGTGC
TGCGAGACGCAGCCCCGCGG

Product: high-affinity nickel-transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MVGAAVALVAAGLGFWLSGGDRLVTAWALDGQREAQGAMAGALRRLRAGEAAAVASLMIVCFGYGFFHAVGPGHGKLLIG
GYGAAREVGAVRLSAVALASSLAQGLTAVMLVGAGVWLIGWGRERMTQMADQVFAPLSFAAIALVGLWLVWRGARGLWRL
QRIAAHDHDHDHHPHDHDHDHDHGHGHGDDGAVCGSCGHSHGPSAEAVARAAGPREVAALIAAVAIRPCTGALFVLILTA
QMGVFWAGVLGTLAMALGTASVTILVAVAAVGLRRSALAGLADSPILARAQPILELAVGALVAVLATHLALAAL

Sequences:

>Translated_314_residues
MVGAAVALVAAGLGFWLSGGDRLVTAWALDGQREAQGAMAGALRRLRAGEAAAVASLMIVCFGYGFFHAVGPGHGKLLIG
GYGAAREVGAVRLSAVALASSLAQGLTAVMLVGAGVWLIGWGRERMTQMADQVFAPLSFAAIALVGLWLVWRGARGLWRL
QRIAAHDHDHDHHPHDHDHDHDHGHGHGDDGAVCGSCGHSHGPSAEAVARAAGPREVAALIAAVAIRPCTGALFVLILTA
QMGVFWAGVLGTLAMALGTASVTILVAVAAVGLRRSALAGLADSPILARAQPILELAVGALVAVLATHLALAAL
>Mature_314_residues
MVGAAVALVAAGLGFWLSGGDRLVTAWALDGQREAQGAMAGALRRLRAGEAAAVASLMIVCFGYGFFHAVGPGHGKLLIG
GYGAAREVGAVRLSAVALASSLAQGLTAVMLVGAGVWLIGWGRERMTQMADQVFAPLSFAAIALVGLWLVWRGARGLWRL
QRIAAHDHDHDHHPHDHDHDHDHGHGHGDDGAVCGSCGHSHGPSAEAVARAAGPREVAALIAAVAIRPCTGALFVLILTA
QMGVFWAGVLGTLAMALGTASVTILVAVAAVGLRRSALAGLADSPILARAQPILELAVGALVAVLATHLALAAL

Specific function: Efflux system for nickel and cobalt (Potential) [H]

COG id: COG2215

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NiCoT transporter (TC 2.A.52) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011541 [H]

Pfam domain/function: PF03824 NicO [H]

EC number: NA

Molecular weight: Translated: 32004; Mature: 32004

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGAAVALVAAGLGFWLSGGDRLVTAWALDGQREAQGAMAGALRRLRAGEAAAVASLMIV
CCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
CFGYGFFHAVGPGHGKLLIGGYGAAREVGAVRLSAVALASSLAQGLTAVMLVGAGVWLIG
HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
WGRERMTQMADQVFAPLSFAAIALVGLWLVWRGARGLWRLQRIAAHDHDHDHHPHDHDHD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
HDHGHGHGDDGAVCGSCGHSHGPSAEAVARAAGPREVAALIAAVAIRPCTGALFVLILTA
CCCCCCCCCCCCEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
QMGVFWAGVLGTLAMALGTASVTILVAVAAVGLRRSALAGLADSPILARAQPILELAVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LVAVLATHLALAAL
HHHHHHHHHHHHCC
>Mature Secondary Structure
MVGAAVALVAAGLGFWLSGGDRLVTAWALDGQREAQGAMAGALRRLRAGEAAAVASLMIV
CCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
CFGYGFFHAVGPGHGKLLIGGYGAAREVGAVRLSAVALASSLAQGLTAVMLVGAGVWLIG
HHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
WGRERMTQMADQVFAPLSFAAIALVGLWLVWRGARGLWRLQRIAAHDHDHDHHPHDHDHD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
HDHGHGHGDDGAVCGSCGHSHGPSAEAVARAAGPREVAALIAAVAIRPCTGALFVLILTA
CCCCCCCCCCCCEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
QMGVFWAGVLGTLAMALGTASVTILVAVAAVGLRRSALAGLADSPILARAQPILELAVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LVAVLATHLALAAL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]