Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054419

Identifier: 89054419

GI number: 89054419

Start: 1916472

End: 1917140

Strand: Direct

Name: 89054419

Synonym: Jann_1928

Alternate gene names: NA

Gene position: 1916472-1917140 (Clockwise)

Preceding gene: 89054410

Following gene: 89054420

Centisome position: 44.38

GC content: 65.77

Gene sequence:

>669_bases
ATGAGTTTGCCCGCGCCCGCCCCCCGACTCGCCGTGCCTGCCCTGGCCGCGCTGTGCATCGGGCTCTGGCCGTCGGCGCC
CGCCGCCCATCCGCATATCTTCGTCGATGCCGGTCTGCGCCTTGTGATGGTGGGGGGCACGGTGACGGCGGTTGAGGTGA
CCTGGCTATACGATGAGCTATACACCTTGATTTTGCTGGAGGATTACGGATTGGACCCGGATTTCGATCTGGTCCTTACG
GAGGCGGAAATCGCCGCGACGCTGGGGTTTGACCTGAACTGGTCCCATGGGTTTGAAGGGGGGCTGATCATGCATCGCGG
CGACGCGGAGCTGGAGCTGGGAGACCCGTCGCCGGTGTCGCTGGAATTGGTGGGAGAGGGGCAGATCCGCACCACCCACC
GCCGCGCGGTCATTGATCCGGGCGGCGCGGAGGCGCTGGTGGCGCAGGTCTATGATCCGGAGTTCTACGTGGCCTTCGAG
ATGATAGGCGAGATGGTGGTGGAGGGCGCACCCTGCACGCCGGAGTTGATCCGCGCCGACCTTGATGCGGCCTATGCCGG
GCTGGAGGCCGCGTTGGACGCCATCGGTGGCGTGATCGCGGCGGAGGATAATTTTCCGCGAGTGGGCGGGCTGTTCGCGG
ACCGGGTGGTGTTTGAATGCGCTGGCTGA

Upstream 100 bases:

>100_bases
TTTGCCATACTCGGACAATGTAATTCAGATTCAGCAACAATTTGCGCACGCGGTCCGGGCAGCGCTTGCGGGTCCGGGCC
GGGCGGCCAATATAGCGCCC

Downstream 100 bases:

>100_bases
TGGTGGGCGCGGCTGTCGCGCTGGTCGCGGCGGGCCTGGGCTTCTGGCTTTCGGGCGGGGACCGTTTGGTGACGGCCTGG
GCGCTGGATGGGCAGAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSLPAPAPRLAVPALAALCIGLWPSAPAAHPHIFVDAGLRLVMVGGTVTAVEVTWLYDELYTLILLEDYGLDPDFDLVLT
EAEIAATLGFDLNWSHGFEGGLIMHRGDAELELGDPSPVSLELVGEGQIRTTHRRAVIDPGGAEALVAQVYDPEFYVAFE
MIGEMVVEGAPCTPELIRADLDAAYAGLEAALDAIGGVIAAEDNFPRVGGLFADRVVFECAG

Sequences:

>Translated_222_residues
MSLPAPAPRLAVPALAALCIGLWPSAPAAHPHIFVDAGLRLVMVGGTVTAVEVTWLYDELYTLILLEDYGLDPDFDLVLT
EAEIAATLGFDLNWSHGFEGGLIMHRGDAELELGDPSPVSLELVGEGQIRTTHRRAVIDPGGAEALVAQVYDPEFYVAFE
MIGEMVVEGAPCTPELIRADLDAAYAGLEAALDAIGGVIAAEDNFPRVGGLFADRVVFECAG
>Mature_221_residues
SLPAPAPRLAVPALAALCIGLWPSAPAAHPHIFVDAGLRLVMVGGTVTAVEVTWLYDELYTLILLEDYGLDPDFDLVLTE
AEIAATLGFDLNWSHGFEGGLIMHRGDAELELGDPSPVSLELVGEGQIRTTHRRAVIDPGGAEALVAQVYDPEFYVAFEM
IGEMVVEGAPCTPELIRADLDAAYAGLEAALDAIGGVIAAEDNFPRVGGLFADRVVFECAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23501; Mature: 23370

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPAPAPRLAVPALAALCIGLWPSAPAAHPHIFVDAGLRLVMVGGTVTAVEVTWLYDEL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCEEEEEEEEEEHHHH
YTLILLEDYGLDPDFDLVLTEAEIAATLGFDLNWSHGFEGGLIMHRGDAELELGDPSPVS
EEEEEEECCCCCCCCEEEEECHHEEEEECCCCCCCCCCCCCEEEECCCCEEEECCCCCEE
LELVGEGQIRTTHRRAVIDPGGAEALVAQVYDPEFYVAFEMIGEMVVEGAPCTPELIRAD
EEEEECCCEEEECCEEEECCCCCCEEEEEEECCCEEHHHHHHHHHHHCCCCCCHHHHHHH
LDAAYAGLEAALDAIGGVIAAEDNFPRVGGLFADRVVFECAG
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHEEEEEECC
>Mature Secondary Structure 
SLPAPAPRLAVPALAALCIGLWPSAPAAHPHIFVDAGLRLVMVGGTVTAVEVTWLYDEL
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEECCEEEEEEEEEEHHHH
YTLILLEDYGLDPDFDLVLTEAEIAATLGFDLNWSHGFEGGLIMHRGDAELELGDPSPVS
EEEEEEECCCCCCCCEEEEECHHEEEEECCCCCCCCCCCCCEEEECCCCEEEECCCCCEE
LELVGEGQIRTTHRRAVIDPGGAEALVAQVYDPEFYVAFEMIGEMVVEGAPCTPELIRAD
EEEEECCCEEEECCEEEECCCCCCEEEEEEECCCEEHHHHHHHHHHHCCCCCCHHHHHHH
LDAAYAGLEAALDAIGGVIAAEDNFPRVGGLFADRVVFECAG
HHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA