Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054382

Identifier: 89054382

GI number: 89054382

Start: 1880219

End: 1880548

Strand: Direct

Name: 89054382

Synonym: Jann_1891

Alternate gene names: NA

Gene position: 1880219-1880548 (Clockwise)

Preceding gene: 89054378

Following gene: 89054389

Centisome position: 43.54

GC content: 61.52

Gene sequence:

>330_bases
ATGCCCCGTCGCAATCGGCGGACCGCATCTGACACGCAACCAAAGAAAGGGATATATCCCATGCGATCCGAATTTCACAC
ACCCCGTCTCGGGGCCATGACCATGGCTGCCGCCTTTGCTGTTCTTGTAGGCGGCGCAAGCCTCGCCATGGGCCAGGCCG
AGTCCGTCGACAGTGATGGTGACGGTATGGTCAGCTTCGCAGAGTTGCTGGTGCTGATGCCCGCTCTGAGCGAAGAGGAA
TATCAGGCGCTCGACGCGGATGCCGATGGCCTTCTGAGCGGCGAAGAGATCGGGGCCGCGCAAGATGCCGGGCTTATTCC
AGCCGGCTGA

Upstream 100 bases:

>100_bases
TGCCCTGCGCAATCGCCCCGATGGGCAGGGCACCGCCGAGATCGAGAGGTGGAGTGCGCTGTGGGGACGAAACGGCCTCC
GGCAGGCTCTTCCCCTATAG

Downstream 100 bases:

>100_bases
TGCAGCTCCCTCCCGATGGGGGTGCCTGCCGGGACACCGGTGGGCAGCCCCCATGGGCGAGACGCGGGGGCGGGGCAGAC
GGCCCCCGCGTTTTGACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MPRRNRRTASDTQPKKGIYPMRSEFHTPRLGAMTMAAAFAVLVGGASLAMGQAESVDSDGDGMVSFAELLVLMPALSEEE
YQALDADADGLLSGEEIGAAQDAGLIPAG

Sequences:

>Translated_109_residues
MPRRNRRTASDTQPKKGIYPMRSEFHTPRLGAMTMAAAFAVLVGGASLAMGQAESVDSDGDGMVSFAELLVLMPALSEEE
YQALDADADGLLSGEEIGAAQDAGLIPAG
>Mature_108_residues
PRRNRRTASDTQPKKGIYPMRSEFHTPRLGAMTMAAAFAVLVGGASLAMGQAESVDSDGDGMVSFAELLVLMPALSEEEY
QALDADADGLLSGEEIGAAQDAGLIPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11343; Mature: 11212

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRNRRTASDTQPKKGIYPMRSEFHTPRLGAMTMAAAFAVLVGGASLAMGQAESVDSDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
DGMVSFAELLVLMPALSEEEYQALDADADGLLSGEEIGAAQDAGLIPAG
CCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRRNRRTASDTQPKKGIYPMRSEFHTPRLGAMTMAAAFAVLVGGASLAMGQAESVDSDG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
DGMVSFAELLVLMPALSEEEYQALDADADGLLSGEEIGAAQDAGLIPAG
CCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA