| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054389
Identifier: 89054389
GI number: 89054389
Start: 1885825
End: 1887702
Strand: Direct
Name: 89054389
Synonym: Jann_1898
Alternate gene names: NA
Gene position: 1885825-1887702 (Clockwise)
Preceding gene: 89054382
Following gene: 89054390
Centisome position: 43.67
GC content: 63.37
Gene sequence:
>1878_bases ATGAAAGACATCGATACGAGCGATTTGAGCTGGGATGATTGGGACGAGCGGGTGCGCCCGGCCCCGGAGGTGACGGATTT CGACCGCGTAGTGGAGACGGCCATGACACGCCGCGGCGTGCTGGGATCGCTGGTCGCGCTGGGGTCCGGGGCTGCGGTGA TGGGCACGGGGCTGCTGCGCGCCACGACCGCGATTGCAGATGGTCAGATAAACTTCGCGTTCCAGCCGATCCCGATTTTC ACCGACAACACGGTCCATGTGCCCGACGGCTATACCTGGAGCACCGTCGCGCGATGGGGCGACCCGCTGTTCTCGGGCGC GCCGACGTTCGACAATGGCCACGGCGTCGACGGCTCTGACAGGATTTTCGGCGAGAACACCGACGGGATGGAATTGTTCC GCGTGGGCGAGGCCGAGGTCATCACGGTCAACCATGAATATGTGAACCCCGCGATCAACATCCCCGAGCGCGAGACGCCG ACCGAAGACGATGTGATGACGTTGATGAACCTTCAGGGCGTCACGGTCATGGAAGTGGCGCGGGGCGAGGCGGGATATGA GGTTGTCGTCGACAGCCCGCTCAACCGTCGCATCCACCACAACACGCCGATGACCCTTGCGGGACCCGCTGCCGGGCACC CGCTGCTGCAAACCGCCGCCGATCCGTCGGGGACAGAGGTGTTTGGAACGATGAACAATTGCGGGTCGGGCCGTACCCTG TGGGGCACCTATCTGACCTGCGAAGAAAACTTCAACGGCTACTTCGGCTCCACCGATGCGGATCTGGACCTGCCCGAGGG GTTCGACCGCTATGGCATCGATCATGAGAGCCGCTATGCGTATGAGCTGTATCATGCGCGCTATGATATCAGCCAAGAGC CCAATGAAGCGCATCGCTTTGGGTATATCGTAGAAATTGATCCCGCCGATCCGACGTCTCAGCCAGTAAAGCGCACAGCA CTTGGGCGCTTCAAGCACGAGAATGCGGCCATGACCCTGGCCGAGGATGGCCGTGTTGTCGTTTATATGGGCGATGATGA ACGCGGGGAGTTCATGTATAAATATGTGTCGAACGGCACCTATACCGACGGCGGCCCCACCGACGGCCTGCTGGATGACG GCACGCTCTACGCCGCCTATTTCAGCGCGGACGGCACCGGGGAATGGCGCGCGCTGACGCCCGACACGACGCAGATGGAT GCCGCGATGATCTGCATCCACACCCGTCACGCGGGATCGAGCGTCGGGGCGACCACGATGGACCGGCCTGAGTGGGTGGC GGTGTCTACCACTTTGGCCGAGGCCTATTGCTGCCTGACCAACAACTCGCGCCGGGCCGAAGGGTTCACCAACGCCGGGG GCGATCCGGCAGAGCCCGCGCCCGGCACCCCGAACCCGCGCGCGGAAAATCGTTACGGGCAGATCGTGCGCTGGCGACCG GATGGCGAAGATCACGGGGCCGACACGTTCACCTGGGATCTTTACGTGATGGCAGGCAACCCGGTTGTGGGTCTGGGCCT TTATGCGGGGTCCGACAATGTGACCGAGGGCAATATGTTCAACTCGCCCGACGGCATGCAGGTCGACAGCACCGGGTTGA TCTGGATCCAGACCGACGGCGACGACAGCAATGAGGGCGCGTTTACCGGCATGGGCAACAACCAGATGCTGATCGGTCAC CCCGAAACCGGTGAGATCGCCCGCTTCCTAACCGGCCCCAGCGGCAGCGAAGTCACCGGCCTGACCTGGAACAGTGACCG CACGGTGGCGTTTGTGGGCATTCAGCACCCTGGCGGCACCTGGCCCGATGGCGGCGACAGCCTGCCCCGGTCCTCCGTGA TCGCGGTCTGGCGCGATGATGGCGCTGCAATCGGCTGA
Upstream 100 bases:
>100_bases ACACAATCATTACAAAGCTGTCTTGGGACCCTTCTAGCGTTGAAAGCAGGCACGCGGGGATGCGCGGGCTGCCGCATGTT TACAAAGCTAGGACATCGAG
Downstream 100 bases:
>100_bases CGCTTAAATGGTCAATGTAAGGAGAGGGGGCCGTACAATTGTGCGACCCCGTCCGGTTTTGATGCGGCCGTGCAGTGGAG CGTGGGGCACAGAATCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MKDIDTSDLSWDDWDERVRPAPEVTDFDRVVETAMTRRGVLGSLVALGSGAAVMGTGLLRATTAIADGQINFAFQPIPIF TDNTVHVPDGYTWSTVARWGDPLFSGAPTFDNGHGVDGSDRIFGENTDGMELFRVGEAEVITVNHEYVNPAINIPERETP TEDDVMTLMNLQGVTVMEVARGEAGYEVVVDSPLNRRIHHNTPMTLAGPAAGHPLLQTAADPSGTEVFGTMNNCGSGRTL WGTYLTCEENFNGYFGSTDADLDLPEGFDRYGIDHESRYAYELYHARYDISQEPNEAHRFGYIVEIDPADPTSQPVKRTA LGRFKHENAAMTLAEDGRVVVYMGDDERGEFMYKYVSNGTYTDGGPTDGLLDDGTLYAAYFSADGTGEWRALTPDTTQMD AAMICIHTRHAGSSVGATTMDRPEWVAVSTTLAEAYCCLTNNSRRAEGFTNAGGDPAEPAPGTPNPRAENRYGQIVRWRP DGEDHGADTFTWDLYVMAGNPVVGLGLYAGSDNVTEGNMFNSPDGMQVDSTGLIWIQTDGDDSNEGAFTGMGNNQMLIGH PETGEIARFLTGPSGSEVTGLTWNSDRTVAFVGIQHPGGTWPDGGDSLPRSSVIAVWRDDGAAIG
Sequences:
>Translated_625_residues MKDIDTSDLSWDDWDERVRPAPEVTDFDRVVETAMTRRGVLGSLVALGSGAAVMGTGLLRATTAIADGQINFAFQPIPIF TDNTVHVPDGYTWSTVARWGDPLFSGAPTFDNGHGVDGSDRIFGENTDGMELFRVGEAEVITVNHEYVNPAINIPERETP TEDDVMTLMNLQGVTVMEVARGEAGYEVVVDSPLNRRIHHNTPMTLAGPAAGHPLLQTAADPSGTEVFGTMNNCGSGRTL WGTYLTCEENFNGYFGSTDADLDLPEGFDRYGIDHESRYAYELYHARYDISQEPNEAHRFGYIVEIDPADPTSQPVKRTA LGRFKHENAAMTLAEDGRVVVYMGDDERGEFMYKYVSNGTYTDGGPTDGLLDDGTLYAAYFSADGTGEWRALTPDTTQMD AAMICIHTRHAGSSVGATTMDRPEWVAVSTTLAEAYCCLTNNSRRAEGFTNAGGDPAEPAPGTPNPRAENRYGQIVRWRP DGEDHGADTFTWDLYVMAGNPVVGLGLYAGSDNVTEGNMFNSPDGMQVDSTGLIWIQTDGDDSNEGAFTGMGNNQMLIGH PETGEIARFLTGPSGSEVTGLTWNSDRTVAFVGIQHPGGTWPDGGDSLPRSSVIAVWRDDGAAIG >Mature_625_residues MKDIDTSDLSWDDWDERVRPAPEVTDFDRVVETAMTRRGVLGSLVALGSGAAVMGTGLLRATTAIADGQINFAFQPIPIF TDNTVHVPDGYTWSTVARWGDPLFSGAPTFDNGHGVDGSDRIFGENTDGMELFRVGEAEVITVNHEYVNPAINIPERETP TEDDVMTLMNLQGVTVMEVARGEAGYEVVVDSPLNRRIHHNTPMTLAGPAAGHPLLQTAADPSGTEVFGTMNNCGSGRTL WGTYLTCEENFNGYFGSTDADLDLPEGFDRYGIDHESRYAYELYHARYDISQEPNEAHRFGYIVEIDPADPTSQPVKRTA LGRFKHENAAMTLAEDGRVVVYMGDDERGEFMYKYVSNGTYTDGGPTDGLLDDGTLYAAYFSADGTGEWRALTPDTTQMD AAMICIHTRHAGSSVGATTMDRPEWVAVSTTLAEAYCCLTNNSRRAEGFTNAGGDPAEPAPGTPNPRAENRYGQIVRWRP DGEDHGADTFTWDLYVMAGNPVVGLGLYAGSDNVTEGNMFNSPDGMQVDSTGLIWIQTDGDDSNEGAFTGMGNNQMLIGH PETGEIARFLTGPSGSEVTGLTWNSDRTVAFVGIQHPGGTWPDGGDSLPRSSVIAVWRDDGAAIG
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67578; Mature: 67578
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIDTSDLSWDDWDERVRPAPEVTDFDRVVETAMTRRGVLGSLVALGSGAAVMGTGLLR CCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCCHHH ATTAIADGQINFAFQPIPIFTDNTVHVPDGYTWSTVARWGDPLFSGAPTFDNGHGVDGSD HEEEEECCEEEEEEEEEEEEECCEEECCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCC RIFGENTDGMELFRVGEAEVITVNHEYVNPAINIPERETPTEDDVMTLMNLQGVTVMEVA CEECCCCCCEEEEEECCEEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEC RGEAGYEVVVDSPLNRRIHHNTPMTLAGPAAGHPLLQTAADPSGTEVFGTMNNCGSGRTL CCCCCCEEEECCCCCCCEECCCCEEEECCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEE WGTYLTCEENFNGYFGSTDADLDLPEGFDRYGIDHESRYAYELYHARYDISQEPNEAHRF EEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEECCCCCCCCHHHE GYIVEIDPADPTSQPVKRTALGRFKHENAAMTLAEDGRVVVYMGDDERGEFMYKYVSNGT EEEEEECCCCCCCCHHHHHHHHHEECCCCEEEEECCCEEEEEECCCCCCCEEEEEECCCE YTDGGPTDGLLDDGTLYAAYFSADGTGEWRALTPDTTQMDAAMICIHTRHAGSSVGATTM ECCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCC DRPEWVAVSTTLAEAYCCLTNNSRRAEGFTNAGGDPAEPAPGTPNPRAENRYGQIVRWRP CCCCEEEEEEEHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC DGEDHGADTFTWDLYVMAGNPVVGLGLYAGSDNVTEGNMFNSPDGMQVDSTGLIWIQTDG CCCCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCEEEEEEECC DDSNEGAFTGMGNNQMLIGHPETGEIARFLTGPSGSEVTGLTWNSDRTVAFVGIQHPGGT CCCCCCEEEECCCCCEEEECCCCCCEEHEEECCCCCCEEEEEECCCCEEEEEEEECCCCC WPDGGDSLPRSSVIAVWRDDGAAIG CCCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure MKDIDTSDLSWDDWDERVRPAPEVTDFDRVVETAMTRRGVLGSLVALGSGAAVMGTGLLR CCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHCCHHH ATTAIADGQINFAFQPIPIFTDNTVHVPDGYTWSTVARWGDPLFSGAPTFDNGHGVDGSD HEEEEECCEEEEEEEEEEEEECCEEECCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCCC RIFGENTDGMELFRVGEAEVITVNHEYVNPAINIPERETPTEDDVMTLMNLQGVTVMEVA CEECCCCCCEEEEEECCEEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEC RGEAGYEVVVDSPLNRRIHHNTPMTLAGPAAGHPLLQTAADPSGTEVFGTMNNCGSGRTL CCCCCCEEEECCCCCCCEECCCCEEEECCCCCCCHHHHCCCCCCCEEEEECCCCCCCCEE WGTYLTCEENFNGYFGSTDADLDLPEGFDRYGIDHESRYAYELYHARYDISQEPNEAHRF EEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEECCCCCCCCHHHE GYIVEIDPADPTSQPVKRTALGRFKHENAAMTLAEDGRVVVYMGDDERGEFMYKYVSNGT EEEEEECCCCCCCCHHHHHHHHHEECCCCEEEEECCCEEEEEECCCCCCCEEEEEECCCE YTDGGPTDGLLDDGTLYAAYFSADGTGEWRALTPDTTQMDAAMICIHTRHAGSSVGATTM ECCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCC DRPEWVAVSTTLAEAYCCLTNNSRRAEGFTNAGGDPAEPAPGTPNPRAENRYGQIVRWRP CCCCEEEEEEEHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC DGEDHGADTFTWDLYVMAGNPVVGLGLYAGSDNVTEGNMFNSPDGMQVDSTGLIWIQTDG CCCCCCCCEEEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCEEEEEEECC DDSNEGAFTGMGNNQMLIGHPETGEIARFLTGPSGSEVTGLTWNSDRTVAFVGIQHPGGT CCCCCCEEEECCCCCEEEECCCCCCEEHEEECCCCCCEEEEEECCCCEEEEEEEECCCCC WPDGGDSLPRSSVIAVWRDDGAAIG CCCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA