Click here to switch to the map view.

The map label for this gene is 89054372

Identifier: 89054372

GI number: 89054372

Start: 1869276

End: 1871003

Strand: Direct

Name: 89054372

Synonym: Jann_1881

Alternate gene names: NA

Gene position: 1869276-1871003 (Clockwise)

Preceding gene: 89054364

Following gene: 89054377

Centisome position: 43.29

GC content: 69.56

Gene sequence:

>1728_bases
ATGGGCGGTCTGAGTATTGGGATATTCTGGGGGGCACTGGTGTCCGCCGTGGGGCTTGTGGCGGTGTCGTTGAGCAATCC
GCTGCCACCGCGCGGAGAGATTGACGGGGCAGAGGTCTCGGTTGCCGGGGAGGCTGGCGACGCGGCGACACCGGCGGAGG
CCCCTGAACAGGACGTGCCAGAGACGGCGGATGTTGAGGTGCCTGAACCATCGCTTGACGTGGCCGCCGAGGTCACCGCA
GAAGCCGCCGAAGGCGGTGTGGAGGAGGAAGCACCGCCCCCCCCGCTTGCGGAAACGTCCGAAGAACCATCCCCGGGAAC
GGCAACGCCTGCCACGGAAGTTCCCTTGCCCTCTGGTTCGGAATTCAACCGTCCGCCGCCCGAGCCGGAGGCGGCATTGC
CCGCCCCCGATGCGGCCCCTGCGGCCATCGCGCCGCAAGCGCCGGCCTTATCGGGAAATGAAATTGCGCCGCGGTTTGAC
ACATCGCCCGCAGCACAGCCCTCGGTCGTGGCGGATGCGCCGACGCAGATCGCCGCCGCCTCGGGCGATGCGACCGCCCC
CGCAAGCCCCGCGCTGGCCCCGGCCCCCGTGATCGCGGGCGGACCCACGGCGCTGACCCAGCCCGAGACCAGCGATGCGC
CCCGGGTGCGCACGTCCTTGTTGCCGCAAATCGCCGCAGAGCCGGACGTCCCGGAGGAAGAGGCGGCTGCAAACGAGGGT
GTGGAGGACGTGACCGGGGAGGAAGAGACCCTTGCCATCGTGGACCCTGAGCCGGAGATCGTGCCCCTGCCCACGCCAGT
CTTTCCGTCCATCGGGGATCAGGCGCTGTCGGAGGAAGAGACCGCGACAGGCGCCCCCGACCTGCCTGCTGACATCGGTG
ATGCGCCCTCCCTGTCGCGCCCGGCAGAGGACGTGGCCGCGCTGCCGACACCAGCCTTTCCGCAAACGAGCGGTTTGCCC
CAGGTCGCGATCCCGATGGAGCGGGAGGCGGAGGTTGAAGAACCGCTGCCCGAAGAAGATCCTGCGCCGGTGGATCTTGG
CGATCTTCCAGCGATCCAGGCCTTTGCCGCGCCCTTTGACGGTGCCGGGGACCGGCCGTTGATGGCTGTGGTCCTGATTG
ATGAGCCGGAGAGCCAGATCGACATCGAGACACTGACGCGGTTTACCTTTCCGGTGGCCTTTGCGGTTGACCCGCTGCAC
CCCGACGGTGCTGCGCGCGCCGCGGCCTACCGGGAGGCCGGGTTTGAGGTGGTGATCCTGGGCGCGATGGTGCCGGACGG
GGCGACGGCGGTGGATACGGAAGTCGCGCTGATGGCAGCACTGGCAGACCTGCCCGAGGCGGTCGCGGTGATCGACACGC
CGGAAGGGCGGATCCAGGGAGACCGCCCGGTTCTGGACGCCATGGTTGGCGCGCTGGCGGACAGTGGCCATGGGTTGGTG
GCCTTTCCCCGGGGGCTGAATGCAGCGGAGCAATCGGCATCGCGTGCGGGTGTGCCGGGGGCGACGGTGTTCCGCTACCT
GGATGGCGAGGACGAGCGCGCGACGGTGATCACACGCTTCCTGTCGCGCGCGGCCTTCGCGGCGGCGCAGGAGGGCACAG
TGGTCGTGGTGGGTCGCACCCGGCCCGATACGGTGACCGCGCTGTTTTCCTGGGCGCTTGGGGGCCGGTCTGAGGCCGTG
GCCCTGGCGCCGTTATCGGCAACGCTGCTGCGGGCGGCATCCGAGTAG

Upstream 100 bases:

>100_bases
GGGCAGGACGCTGCACCCATGGCAGATAAGGGCGTCGGGGGAACAGCCCCTGATCAAACGCGCGGGCAGTGACCGGCGCA
GAGCAGACAGGAGCAGGACC

Downstream 100 bases:

>100_bases
AGGAGCGCGTGCCTTCGGCACTGGCCTGGCGGTCGCGCCTGCGGCGCTTCGGTTATGGTCGCGCCTTTGGCGCTTTAGCT
ATGGTCGCGCCTTTGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Divergent Polysaccharide Deacetylase Family

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MGGLSIGIFWGALVSAVGLVAVSLSNPLPPRGEIDGAEVSVAGEAGDAATPAEAPEQDVPETADVEVPEPSLDVAAEVTA
EAAEGGVEEEAPPPPLAETSEEPSPGTATPATEVPLPSGSEFNRPPPEPEAALPAPDAAPAAIAPQAPALSGNEIAPRFD
TSPAAQPSVVADAPTQIAAASGDATAPASPALAPAPVIAGGPTALTQPETSDAPRVRTSLLPQIAAEPDVPEEEAAANEG
VEDVTGEEETLAIVDPEPEIVPLPTPVFPSIGDQALSEEETATGAPDLPADIGDAPSLSRPAEDVAALPTPAFPQTSGLP
QVAIPMEREAEVEEPLPEEDPAPVDLGDLPAIQAFAAPFDGAGDRPLMAVVLIDEPESQIDIETLTRFTFPVAFAVDPLH
PDGAARAAAYREAGFEVVILGAMVPDGATAVDTEVALMAALADLPEAVAVIDTPEGRIQGDRPVLDAMVGALADSGHGLV
AFPRGLNAAEQSASRAGVPGATVFRYLDGEDERATVITRFLSRAAFAAAQEGTVVVVGRTRPDTVTALFSWALGGRSEAV
ALAPLSATLLRAASE

Sequences:

>Translated_575_residues
MGGLSIGIFWGALVSAVGLVAVSLSNPLPPRGEIDGAEVSVAGEAGDAATPAEAPEQDVPETADVEVPEPSLDVAAEVTA
EAAEGGVEEEAPPPPLAETSEEPSPGTATPATEVPLPSGSEFNRPPPEPEAALPAPDAAPAAIAPQAPALSGNEIAPRFD
TSPAAQPSVVADAPTQIAAASGDATAPASPALAPAPVIAGGPTALTQPETSDAPRVRTSLLPQIAAEPDVPEEEAAANEG
VEDVTGEEETLAIVDPEPEIVPLPTPVFPSIGDQALSEEETATGAPDLPADIGDAPSLSRPAEDVAALPTPAFPQTSGLP
QVAIPMEREAEVEEPLPEEDPAPVDLGDLPAIQAFAAPFDGAGDRPLMAVVLIDEPESQIDIETLTRFTFPVAFAVDPLH
PDGAARAAAYREAGFEVVILGAMVPDGATAVDTEVALMAALADLPEAVAVIDTPEGRIQGDRPVLDAMVGALADSGHGLV
AFPRGLNAAEQSASRAGVPGATVFRYLDGEDERATVITRFLSRAAFAAAQEGTVVVVGRTRPDTVTALFSWALGGRSEAV
ALAPLSATLLRAASE
>Mature_574_residues
GGLSIGIFWGALVSAVGLVAVSLSNPLPPRGEIDGAEVSVAGEAGDAATPAEAPEQDVPETADVEVPEPSLDVAAEVTAE
AAEGGVEEEAPPPPLAETSEEPSPGTATPATEVPLPSGSEFNRPPPEPEAALPAPDAAPAAIAPQAPALSGNEIAPRFDT
SPAAQPSVVADAPTQIAAASGDATAPASPALAPAPVIAGGPTALTQPETSDAPRVRTSLLPQIAAEPDVPEEEAAANEGV
EDVTGEEETLAIVDPEPEIVPLPTPVFPSIGDQALSEEETATGAPDLPADIGDAPSLSRPAEDVAALPTPAFPQTSGLPQ
VAIPMEREAEVEEPLPEEDPAPVDLGDLPAIQAFAAPFDGAGDRPLMAVVLIDEPESQIDIETLTRFTFPVAFAVDPLHP
DGAARAAAYREAGFEVVILGAMVPDGATAVDTEVALMAALADLPEAVAVIDTPEGRIQGDRPVLDAMVGALADSGHGLVA
FPRGLNAAEQSASRAGVPGATVFRYLDGEDERATVITRFLSRAAFAAAQEGTVVVVGRTRPDTVTALFSWALGGRSEAVA
LAPLSATLLRAASE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58046; Mature: 57914

Theoretical pI: Translated: 3.58; Mature: 3.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLSIGIFWGALVSAVGLVAVSLSNPLPPRGEIDGAEVSVAGEAGDAATPAEAPEQDVP
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHCCC
ETADVEVPEPSLDVAAEVTAEAAEGGVEEEAPPPPLAETSEEPSPGTATPATEVPLPSGS
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EFNRPPPEPEAALPAPDAAPAAIAPQAPALSGNEIAPRFDTSPAAQPSVVADAPTQIAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEC
SGDATAPASPALAPAPVIAGGPTALTQPETSDAPRVRTSLLPQIAAEPDVPEEEAAANEG
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCC
VEDVTGEEETLAIVDPEPEIVPLPTPVFPSIGDQALSEEETATGAPDLPADIGDAPSLSR
CHHCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCC
PAEDVAALPTPAFPQTSGLPQVAIPMEREAEVEEPLPEEDPAPVDLGDLPAIQAFAAPFD
CHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHCCCC
GAGDRPLMAVVLIDEPESQIDIETLTRFTFPVAFAVDPLHPDGAARAAAYREAGFEVVIL
CCCCCCEEEEEEEECCCCCCCHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHCCCEEEEE
GAMVPDGATAVDTEVALMAALADLPEAVAVIDTPEGRIQGDRPVLDAMVGALADSGHGLV
EEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEE
AFPRGLNAAEQSASRAGVPGATVFRYLDGEDERATVITRFLSRAAFAAAQEGTVVVVGRT
EECCCCCHHHHHHHHCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
RPDTVTALFSWALGGRSEAVALAPLSATLLRAASE
CCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCC
>Mature Secondary Structure 
GGLSIGIFWGALVSAVGLVAVSLSNPLPPRGEIDGAEVSVAGEAGDAATPAEAPEQDVP
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHCCC
ETADVEVPEPSLDVAAEVTAEAAEGGVEEEAPPPPLAETSEEPSPGTATPATEVPLPSGS
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EFNRPPPEPEAALPAPDAAPAAIAPQAPALSGNEIAPRFDTSPAAQPSVVADAPTQIAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEC
SGDATAPASPALAPAPVIAGGPTALTQPETSDAPRVRTSLLPQIAAEPDVPEEEAAANEG
CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCC
VEDVTGEEETLAIVDPEPEIVPLPTPVFPSIGDQALSEEETATGAPDLPADIGDAPSLSR
CHHCCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCC
PAEDVAALPTPAFPQTSGLPQVAIPMEREAEVEEPLPEEDPAPVDLGDLPAIQAFAAPFD
CHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHCCCC
GAGDRPLMAVVLIDEPESQIDIETLTRFTFPVAFAVDPLHPDGAARAAAYREAGFEVVIL
CCCCCCEEEEEEEECCCCCCCHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHCCCEEEEE
GAMVPDGATAVDTEVALMAALADLPEAVAVIDTPEGRIQGDRPVLDAMVGALADSGHGLV
EEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEE
AFPRGLNAAEQSASRAGVPGATVFRYLDGEDERATVITRFLSRAAFAAAQEGTVVVVGRT
EECCCCCHHHHHHHHCCCCHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
RPDTVTALFSWALGGRSEAVALAPLSATLLRAASE
CCHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA