Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89054317

Identifier: 89054317

GI number: 89054317

Start: 1813636

End: 1814142

Strand: Direct

Name: 89054317

Synonym: Jann_1826

Alternate gene names: NA

Gene position: 1813636-1814142 (Clockwise)

Preceding gene: 89054313

Following gene: 89054318

Centisome position: 42.0

GC content: 59.96

Gene sequence:

>507_bases
ATGTGTCGCTCAGGCCGGGGACAAAGGGAGGAGACGCCCCGACCAACGGCGACTGCTATCGTTGTGCCGGAGGAAGGCGG
TGGCGGAAAGCGCGGGGCCGCACTCCTTGGGCCGCAAACCTGCGCTGCCACTATATTGGGCGATGTTTTCGGCGCGGTGG
CTGTGGATCGGGCGCAGTTGGTCTTGCTTTGCGCGATCGGGGGATTCGCGGGTGATGTGCGTGGCGGGTCGGGTTGGGTG
AATTGTTGCAAAAACCGGCCCGCTGATCACGGCGTAGAGATCGGTTGTCACGGGCCCGTGGGGTTGGTGCAGGGCGATCT
GGGTAATGTGCGTATACGCACCAATATTACACGATTCTCTCGCGTACGTGTGTGGAATGAGGGCGCGTTAGCCTGCATAT
TCATCTCATCGGAACGCAGACAAGCTAAAGCGCTCCACCAAGACACCCAAACCAAAGGGCCGCGAGACACGCCGCCCACA
CATATCGAAAAAGGACTAACACCATGA

Upstream 100 bases:

>100_bases
ATTGTGGCGAGACTGTGGCAGGACCCGCAGAATGTCGGAAAAGGAAAGCTGACGATTGGGAGCGGTGGAAGAGAGACGAG
GTCCCAATCGCCAGCTTTAG

Downstream 100 bases:

>100_bases
AAAAGATCGCAATCATCGCCGCCCTTGCCGCTTCTATCGCCGCTCCGGCCGTCGCACAATCCACCTCCACAGCCTTCGCC
ATCGCGCATTTCAACATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQLVLLCAIGGFAGDVRGGSGWV
NCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFSRVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPT
HIEKGLTP

Sequences:

>Translated_168_residues
MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQLVLLCAIGGFAGDVRGGSGWV
NCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFSRVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPT
HIEKGLTP
>Mature_168_residues
MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQLVLLCAIGGFAGDVRGGSGWV
NCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFSRVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPT
HIEKGLTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17661; Mature: 17661

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQL
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHE
VLLCAIGGFAGDVRGGSGWVNCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFS
EEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCEEECCCCCEEEEEECCEEE
RVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPTHIEKGLTP
EEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MCRSGRGQREETPRPTATAIVVPEEGGGGKRGAALLGPQTCAATILGDVFGAVAVDRAQL
CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHE
VLLCAIGGFAGDVRGGSGWVNCCKNRPADHGVEIGCHGPVGLVQGDLGNVRIRTNITRFS
EEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCEEECCCCCEEEEEECCEEE
RVRVWNEGALACIFISSERRQAKALHQDTQTKGPRDTPPTHIEKGLTP
EEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA