Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054250

Identifier: 89054250

GI number: 89054250

Start: 1747454

End: 1748410

Strand: Direct

Name: 89054250

Synonym: Jann_1759

Alternate gene names: NA

Gene position: 1747454-1748410 (Clockwise)

Preceding gene: 89054249

Following gene: 89054251

Centisome position: 40.47

GC content: 63.53

Gene sequence:

>957_bases
ATGCAAATGAACTTTCTGAAACTGGCCGTTCTGGCCTCCGCCCTGTCCATGGCGGGTTGGGTCGGCGATGCAGCGGCGCA
GGGGCTGCGCAATCCTTGCCCTGCCGCCTGGGCCGGGGATGGCGATTGTGATGAGCCCAACGGGCTGAACCTGTGTGCCT
GGGGCACTGACCCTGTCGATTGCTCCAACCCCAATTCCTATTTCGGCTCAGGTGCCGGGTTCGCCGCCGGGGCCTATACG
TCGCCCACACCCACCCCTACGCCCGTCCCGACACCGGTTCCGGCCCAGGCCTGCCCCTACACCAATGACGGCGATTGTGA
TGAGCCCAATGGCCTGAACCTGTGTGCCTGGGGCTCGGATCCTGTCGATTGTTCCAATCCCAACTCCAATTATGGCCGCG
GGGCCGGGTTCAATGCGGGCATCTATGCGCAGACCCAACCCGCGCCCACGCCTGTGCCCGTCCCGGTCCCCACGCCGGTA
CCGGGTGGCAATATGACAGCCATCAGCCAGGGCGCCTTCGTGCATGGCGGCGGCGGCGGATATACGGGTTGCCCCAACTA
CACCATCGGCAACACCGCGTTCGGTCAGGCCACGATGTATGGTGGCCAGGGCAGCTACCGCGTGCCGCGCATCACGGCGG
GCGGGCGCTATCCGCTGACCAACTGCTTCCCGGGCACCAATTGGCGCGGGTTCACCATCACGCGGCCTGACTTCCGGTTC
TTCTATCAGGGCAACTCGCCCACCGGGCGTCTGACGTTCCAATTGTCCTCCAACGCGGTCGACACAGTGCTGCTGATCAA
CACGCCCGATGGCCGCTGGTACTTCAATGACGACAGTAACGGGACGTTCAACTCGCTTCTGACATTCTCGCCGGTGTTGC
AGGGGCAGTACGACATCTGGGCGGGGGCGTATAACAACTCCTCCAACAACCCGGCGGATCTGTGGATCTACGAATAA

Upstream 100 bases:

>100_bases
CAGGCGGGTGCGGTTCCGCTCAACATTTGCGGGTTTTCTTTGACAGGCCGTGTCCTTGCGCGGTTAATCGCCGAGACAGA
TTTTGACTGAGGGACACGCG

Downstream 100 bases:

>100_bases
CGCGCAGTGCGATGTCCTGAGGACCGCCCCCGGCCTTGACGTGTCAGGCCGGGGGCGGTTTCTGTTGGGTCCATGGAATA
CGCCCCGCTGGAACTGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVDCSNPNSYFGSGAGFAAGAYT
SPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSDPVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPV
PGGNMTAISQGAFVHGGGGGYTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF
FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIWAGAYNNSSNNPADLWIYE

Sequences:

>Translated_318_residues
MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVDCSNPNSYFGSGAGFAAGAYT
SPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSDPVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPV
PGGNMTAISQGAFVHGGGGGYTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF
FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIWAGAYNNSSNNPADLWIYE
>Mature_318_residues
MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVDCSNPNSYFGSGAGFAAGAYT
SPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSDPVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPV
PGGNMTAISQGAFVHGGGGGYTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF
FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIWAGAYNNSSNNPADLWIYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33386; Mature: 33386

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVD
CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
CSNPNSYFGSGAGFAAGAYTSPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
PVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPVPGGNMTAISQGAFVHGGGGG
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCC
YTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF
CCCCCCCEECCCCCCCEEEECCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEECCCEEE
FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIW
EEECCCCCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCHHHHEEECHHHCCCEEEE
AGAYNNSSNNPADLWIYE
EEECCCCCCCCCEEEEEC
>Mature Secondary Structure
MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVD
CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
CSNPNSYFGSGAGFAAGAYTSPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
PVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPVPGGNMTAISQGAFVHGGGGG
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCC
YTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF
CCCCCCCEECCCCCCCEEEECCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEECCCEEE
FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIW
EEECCCCCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCHHHHEEECHHHCCCEEEE
AGAYNNSSNNPADLWIYE
EEECCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA