| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054250
Identifier: 89054250
GI number: 89054250
Start: 1747454
End: 1748410
Strand: Direct
Name: 89054250
Synonym: Jann_1759
Alternate gene names: NA
Gene position: 1747454-1748410 (Clockwise)
Preceding gene: 89054249
Following gene: 89054251
Centisome position: 40.47
GC content: 63.53
Gene sequence:
>957_bases ATGCAAATGAACTTTCTGAAACTGGCCGTTCTGGCCTCCGCCCTGTCCATGGCGGGTTGGGTCGGCGATGCAGCGGCGCA GGGGCTGCGCAATCCTTGCCCTGCCGCCTGGGCCGGGGATGGCGATTGTGATGAGCCCAACGGGCTGAACCTGTGTGCCT GGGGCACTGACCCTGTCGATTGCTCCAACCCCAATTCCTATTTCGGCTCAGGTGCCGGGTTCGCCGCCGGGGCCTATACG TCGCCCACACCCACCCCTACGCCCGTCCCGACACCGGTTCCGGCCCAGGCCTGCCCCTACACCAATGACGGCGATTGTGA TGAGCCCAATGGCCTGAACCTGTGTGCCTGGGGCTCGGATCCTGTCGATTGTTCCAATCCCAACTCCAATTATGGCCGCG GGGCCGGGTTCAATGCGGGCATCTATGCGCAGACCCAACCCGCGCCCACGCCTGTGCCCGTCCCGGTCCCCACGCCGGTA CCGGGTGGCAATATGACAGCCATCAGCCAGGGCGCCTTCGTGCATGGCGGCGGCGGCGGATATACGGGTTGCCCCAACTA CACCATCGGCAACACCGCGTTCGGTCAGGCCACGATGTATGGTGGCCAGGGCAGCTACCGCGTGCCGCGCATCACGGCGG GCGGGCGCTATCCGCTGACCAACTGCTTCCCGGGCACCAATTGGCGCGGGTTCACCATCACGCGGCCTGACTTCCGGTTC TTCTATCAGGGCAACTCGCCCACCGGGCGTCTGACGTTCCAATTGTCCTCCAACGCGGTCGACACAGTGCTGCTGATCAA CACGCCCGATGGCCGCTGGTACTTCAATGACGACAGTAACGGGACGTTCAACTCGCTTCTGACATTCTCGCCGGTGTTGC AGGGGCAGTACGACATCTGGGCGGGGGCGTATAACAACTCCTCCAACAACCCGGCGGATCTGTGGATCTACGAATAA
Upstream 100 bases:
>100_bases CAGGCGGGTGCGGTTCCGCTCAACATTTGCGGGTTTTCTTTGACAGGCCGTGTCCTTGCGCGGTTAATCGCCGAGACAGA TTTTGACTGAGGGACACGCG
Downstream 100 bases:
>100_bases CGCGCAGTGCGATGTCCTGAGGACCGCCCCCGGCCTTGACGTGTCAGGCCGGGGGCGGTTTCTGTTGGGTCCATGGAATA CGCCCCGCTGGAACTGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVDCSNPNSYFGSGAGFAAGAYT SPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSDPVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPV PGGNMTAISQGAFVHGGGGGYTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIWAGAYNNSSNNPADLWIYE
Sequences:
>Translated_318_residues MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVDCSNPNSYFGSGAGFAAGAYT SPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSDPVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPV PGGNMTAISQGAFVHGGGGGYTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIWAGAYNNSSNNPADLWIYE >Mature_318_residues MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVDCSNPNSYFGSGAGFAAGAYT SPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSDPVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPV PGGNMTAISQGAFVHGGGGGYTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIWAGAYNNSSNNPADLWIYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33386; Mature: 33386
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVD CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC CSNPNSYFGSGAGFAAGAYTSPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC PVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPVPGGNMTAISQGAFVHGGGGG CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCC YTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF CCCCCCCEECCCCCCCEEEECCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEECCCEEE FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIW EEECCCCCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCHHHHEEECHHHCCCEEEE AGAYNNSSNNPADLWIYE EEECCCCCCCCCEEEEEC >Mature Secondary Structure MQMNFLKLAVLASALSMAGWVGDAAAQGLRNPCPAAWAGDGDCDEPNGLNLCAWGTDPVD CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCC CSNPNSYFGSGAGFAAGAYTSPTPTPTPVPTPVPAQACPYTNDGDCDEPNGLNLCAWGSD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC PVDCSNPNSNYGRGAGFNAGIYAQTQPAPTPVPVPVPTPVPGGNMTAISQGAFVHGGGGG CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCC YTGCPNYTIGNTAFGQATMYGGQGSYRVPRITAGGRYPLTNCFPGTNWRGFTITRPDFRF CCCCCCCEECCCCCCCEEEECCCCCEECCEEECCCCCCCCCCCCCCCCCEEEEECCCEEE FYQGNSPTGRLTFQLSSNAVDTVLLINTPDGRWYFNDDSNGTFNSLLTFSPVLQGQYDIW EEECCCCCEEEEEEECCCCEEEEEEEECCCCCEEECCCCCCCHHHHEEECHHHCCCEEEE AGAYNNSSNNPADLWIYE EEECCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA