| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054249
Identifier: 89054249
GI number: 89054249
Start: 1746438
End: 1747343
Strand: Direct
Name: 89054249
Synonym: Jann_1758
Alternate gene names: NA
Gene position: 1746438-1747343 (Clockwise)
Preceding gene: 89054247
Following gene: 89054250
Centisome position: 40.45
GC content: 64.02
Gene sequence:
>906_bases ATGGCGTTCCAATCCATTGGCGATGTGCAGGAGGCTTTGGCGGCGGAAGGATACGTTTGCGGGCGGGCCCTGGCGACGGT TGTGTTCCTGGCGCTGACGCTCGGGCGGCCCTTGTTTCTGGAAGGCGAGGCGGGCACCGGAAAGACCGAGATCGCGAAGG CGATTTCCGCGGCCCTCGGACGGCGCCTGATCCGGCTGCAATGCTATGAGGGGCTGGATGCCTCCAGCGCCGTCTATGAA TGGAACTTTGCGGCCCAGATGATCGCCATCCGCACGGCCGAAGCGGGCGGCGGCGCGGACAAAGGCGCGCTGACGGCAGA GCTGTTCAGCGAGGATTACCTGATCGAGCGGCCTTTGCTGCAAGCCATGCGCCCCGATCCGGCGGGGGCGCCTGTTCTGC TGATCGACGAGATTGACCGCACCGATGAGCCGTTTGAGGCATTCCTTCTGGAGGCCCTGTCGGACTTTCAGGTCACGATC CCAGAGTTGGGCGCGGTCAAGGCCCCGGTGCCGCCCATCGTGATCCTGACCTCGAACCGCACGCGCGAAGTTCACGATGC GCTCAAACGCCGCTGTCTGTATCACTGGGTCGATTACCCGGATGTGGAGCGGGAGATGGAGATCCTGCAAGCCCGCGTCC CGGACGCGGCCAAAACGCTCAGCCGGGAGGTCGTGGCCTTCGTGCAGCGCCTGCGCACCGAGGATCTCTTCAAGCGCCCC GGCGTGGCGGAGACGCTGGACTGGGCCAAATGCCTTCTGGCGCTTGATGTGATTGAACTGAGCCCCGAGGTCATCGCCGA CACGCTTGGTGCGATCCTGAAGTACCAGGATGACATCCAGAAGCTGCAAGGGTCCGAGGCGAAACGGATACTGGACGACG TGAAGGCCCAGGCAAACCCGCATTAG
Upstream 100 bases:
>100_bases GAGATGAACATTTGGTTAACAGAGTGTTTCCGGGGCCGCAGGCATCTGCTTGACCTCGGGCCGTGTGCGGGGCCTTGTTG AGCCAAACGGCGGAGGTGAT
Downstream 100 bases:
>100_bases ACGGGCCGGGCAGGCGGGTGCGGTTCCGCTCAACATTTGCGGGTTTTCTTTGACAGGCCGTGTCCTTGCGCGGTTAATCG CCGAGACAGATTTTGACTGA
Product: AAA_5 ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; AAA Family ATPase; AAA_5 ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; ATPase Central Domain-Containing Protein; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; ATPase Protein; Aaa ATPase; ATPase-Like Protein; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MAFQSIGDVQEALAAEGYVCGRALATVVFLALTLGRPLFLEGEAGTGKTEIAKAISAALGRRLIRLQCYEGLDASSAVYE WNFAAQMIAIRTAEAGGGADKGALTAELFSEDYLIERPLLQAMRPDPAGAPVLLIDEIDRTDEPFEAFLLEALSDFQVTI PELGAVKAPVPPIVILTSNRTREVHDALKRRCLYHWVDYPDVEREMEILQARVPDAAKTLSREVVAFVQRLRTEDLFKRP GVAETLDWAKCLLALDVIELSPEVIADTLGAILKYQDDIQKLQGSEAKRILDDVKAQANPH
Sequences:
>Translated_301_residues MAFQSIGDVQEALAAEGYVCGRALATVVFLALTLGRPLFLEGEAGTGKTEIAKAISAALGRRLIRLQCYEGLDASSAVYE WNFAAQMIAIRTAEAGGGADKGALTAELFSEDYLIERPLLQAMRPDPAGAPVLLIDEIDRTDEPFEAFLLEALSDFQVTI PELGAVKAPVPPIVILTSNRTREVHDALKRRCLYHWVDYPDVEREMEILQARVPDAAKTLSREVVAFVQRLRTEDLFKRP GVAETLDWAKCLLALDVIELSPEVIADTLGAILKYQDDIQKLQGSEAKRILDDVKAQANPH >Mature_300_residues AFQSIGDVQEALAAEGYVCGRALATVVFLALTLGRPLFLEGEAGTGKTEIAKAISAALGRRLIRLQCYEGLDASSAVYEW NFAAQMIAIRTAEAGGGADKGALTAELFSEDYLIERPLLQAMRPDPAGAPVLLIDEIDRTDEPFEAFLLEALSDFQVTIP ELGAVKAPVPPIVILTSNRTREVHDALKRRCLYHWVDYPDVEREMEILQARVPDAAKTLSREVVAFVQRLRTEDLFKRPG VAETLDWAKCLLALDVIELSPEVIADTLGAILKYQDDIQKLQGSEAKRILDDVKAQANPH
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33029; Mature: 32898
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFQSIGDVQEALAAEGYVCGRALATVVFLALTLGRPLFLEGEAGTGKTEIAKAISAALG CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH RRLIRLQCYEGLDASSAVYEWNFAAQMIAIRTAEAGGGADKGALTAELFSEDYLIERPLL HHHHHHHHHCCCCCCCCEEEHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCHHHHHHHH QAMRPDPAGAPVLLIDEIDRTDEPFEAFLLEALSDFQVTIPELGAVKAPVPPIVILTSNR HHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEECCC TREVHDALKRRCLYHWVDYPDVEREMEILQARVPDAAKTLSREVVAFVQRLRTEDLFKRP CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC GVAETLDWAKCLLALDVIELSPEVIADTLGAILKYQDDIQKLQGSEAKRILDDVKAQANP CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC H C >Mature Secondary Structure AFQSIGDVQEALAAEGYVCGRALATVVFLALTLGRPLFLEGEAGTGKTEIAKAISAALG CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH RRLIRLQCYEGLDASSAVYEWNFAAQMIAIRTAEAGGGADKGALTAELFSEDYLIERPLL HHHHHHHHHCCCCCCCCEEEHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCHHHHHHHH QAMRPDPAGAPVLLIDEIDRTDEPFEAFLLEALSDFQVTIPELGAVKAPVPPIVILTSNR HHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEEECCC TREVHDALKRRCLYHWVDYPDVEREMEILQARVPDAAKTLSREVVAFVQRLRTEDLFKRP CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC GVAETLDWAKCLLALDVIELSPEVIADTLGAILKYQDDIQKLQGSEAKRILDDVKAQANP CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC H C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA