| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054251
Identifier: 89054251
GI number: 89054251
Start: 1748483
End: 1749742
Strand: Direct
Name: 89054251
Synonym: Jann_1760
Alternate gene names: NA
Gene position: 1748483-1749742 (Clockwise)
Preceding gene: 89054250
Following gene: 89054252
Centisome position: 40.49
GC content: 67.22
Gene sequence:
>1260_bases ATGGAATACGCCCCGCTGGAACTGCCCGACAGGCCGCAACTCACCCGCAACATCACCCATTTTGCCCGCGCGCTGCGTGT GGCGGGCCTGCCTGCTGGACCGGGGCGGGTGGCGGATGCGATCCGGGCGGTGGCCGTCGCCGGGTTCAGTGAGAGGGCAG AGTTCTACTACACCCTGCGCGCCTGCTTCACCTCACGGCCCGAGCATCGGGCAGTTTACGATCAGATCTTCCGCCTCTAT TGGCGCGACCCGCAATATCTGGAGCATATGATGTCGATGCTCACACCTGCGGTGCGGGGCGTGGCGGAGGAGCGGAAGAT CAAAGCGGGCGAAAAGCGCGCGGCGGAGGCGCTGTTGCATGGGGTGGAGCGGGACGCGCCCGACCTGCCCGAGGGTGAAC AGGACGGCACCGAGATCGAGGTGGATGCGACGCTGACGATGTCGCGGGAAGAACGCCTGAAGACGCTCGATTTCGAGCAG ATGTCCGTGGCGGAGATGGCGGAGGCCAAGCGCCTGATTGCGCAAATGACCCTGTCGGTGCCGCCTTTGATGTCGCGTCG GACGATTGCCGCGCCCCATGGCGCACGGCCTGACTGGCGGCGCACGATGCGGGCCGCGATGCGGCGCGGTGGCGATGTGG TGGAGTTTGCCCGCCGCGACCGGCGACAACGCTGGCCGTCTTTGGTGGCGCTGTGCGATATCTCGGGCTCCATGAGCAGT TATTCCCGGGCGGTGCTGCACTTTTTGCACGCGGTGAGCAATCAGAAGGGGGCGGGTTGGGCGGAGGTTCATGCCTTCAC CTTCGGCACACAACTGACCAACATCACCCGGCACATGGGTGCGCGGGATGTGGATGCGGCGCTGGCAGCGGCAGGCGCGG AGGCACAGGATTGGGAGGGCGGCACACGGATCGGCGCGTGTCTGGAAAGCTTCAACCGCGACTGGTCGCGCCGGGTGCTC GGGCGCGGGGCGGTGGTGTTGCTGATCACCGACGGCCTCGACCGCGATGAACCGGAGCGGCTGGAGGCGGCAATGGAACG TCTGTCCCTGTCATCGCGCCGGGTGATCTGGATCAACCCGCTTCTGCGCTGGGACGGGTTCGCGCCCAAGGCCGCAGGCA TCCGCGCAATGCTGCCCCATGTGTCCAGCTTCCGTGCGGGGCACAACATCGCGGCCTTGGCAGGGCTGGCCGAGGCCGTC GCGCGCCCGGACGATCCGGGAGAAAAGGCGCGCCTGATGGCAGCCTTGCGCGAGGCTTGA
Upstream 100 bases:
>100_bases CCCGGCGGATCTGTGGATCTACGAATAACGCGCAGTGCGATGTCCTGAGGACCGCCCCCGGCCTTGACGTGTCAGGCCGG GGGCGGTTTCTGTTGGGTCC
Downstream 100 bases:
>100_bases CCAAAAGGAGCGCGTTCGCGCACGAGATATTTTGCGCGCGGGGCGCGCGGGAGGGGCGCTGCCCCTTATGCGTCCTTTTC CAAGGAAAAAGACGCAGACC
Product: VWA containing CoxE-like protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; VWA Domain Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; CoxE Protein; Von Willebrand Factor Type A Domain-Containing Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLRACFTSRPEHRAVYDQIFRLY WRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLHGVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQ MSVAEMAEAKRLIAQMTLSVPPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEGGTRIGACLESFNRDWSRRVL GRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINPLLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAV ARPDDPGEKARLMAALREA
Sequences:
>Translated_419_residues MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLRACFTSRPEHRAVYDQIFRLY WRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLHGVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQ MSVAEMAEAKRLIAQMTLSVPPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEGGTRIGACLESFNRDWSRRVL GRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINPLLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAV ARPDDPGEKARLMAALREA >Mature_419_residues MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLRACFTSRPEHRAVYDQIFRLY WRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLHGVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQ MSVAEMAEAKRLIAQMTLSVPPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEGGTRIGACLESFNRDWSRRVL GRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINPLLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAV ARPDDPGEKARLMAALREA
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46598; Mature: 46598
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLR CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH ACFTSRPEHRAVYDQIFRLYWRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLH HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQMSVAEMAEAKRLIAQMTLSV HHHCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC PPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHEEECCCCCCHHH YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC GTRIGACLESFNRDWSRRVLGRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINP CHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECC LLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAVARPDDPGEKARLMAALREA HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLR CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH ACFTSRPEHRAVYDQIFRLYWRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLH HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQMSVAEMAEAKRLIAQMTLSV HHHCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC PPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHEEECCCCCCHHH YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC GTRIGACLESFNRDWSRRVLGRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINP CHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECC LLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAVARPDDPGEKARLMAALREA HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA