Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054251

Identifier: 89054251

GI number: 89054251

Start: 1748483

End: 1749742

Strand: Direct

Name: 89054251

Synonym: Jann_1760

Alternate gene names: NA

Gene position: 1748483-1749742 (Clockwise)

Preceding gene: 89054250

Following gene: 89054252

Centisome position: 40.49

GC content: 67.22

Gene sequence:

>1260_bases
ATGGAATACGCCCCGCTGGAACTGCCCGACAGGCCGCAACTCACCCGCAACATCACCCATTTTGCCCGCGCGCTGCGTGT
GGCGGGCCTGCCTGCTGGACCGGGGCGGGTGGCGGATGCGATCCGGGCGGTGGCCGTCGCCGGGTTCAGTGAGAGGGCAG
AGTTCTACTACACCCTGCGCGCCTGCTTCACCTCACGGCCCGAGCATCGGGCAGTTTACGATCAGATCTTCCGCCTCTAT
TGGCGCGACCCGCAATATCTGGAGCATATGATGTCGATGCTCACACCTGCGGTGCGGGGCGTGGCGGAGGAGCGGAAGAT
CAAAGCGGGCGAAAAGCGCGCGGCGGAGGCGCTGTTGCATGGGGTGGAGCGGGACGCGCCCGACCTGCCCGAGGGTGAAC
AGGACGGCACCGAGATCGAGGTGGATGCGACGCTGACGATGTCGCGGGAAGAACGCCTGAAGACGCTCGATTTCGAGCAG
ATGTCCGTGGCGGAGATGGCGGAGGCCAAGCGCCTGATTGCGCAAATGACCCTGTCGGTGCCGCCTTTGATGTCGCGTCG
GACGATTGCCGCGCCCCATGGCGCACGGCCTGACTGGCGGCGCACGATGCGGGCCGCGATGCGGCGCGGTGGCGATGTGG
TGGAGTTTGCCCGCCGCGACCGGCGACAACGCTGGCCGTCTTTGGTGGCGCTGTGCGATATCTCGGGCTCCATGAGCAGT
TATTCCCGGGCGGTGCTGCACTTTTTGCACGCGGTGAGCAATCAGAAGGGGGCGGGTTGGGCGGAGGTTCATGCCTTCAC
CTTCGGCACACAACTGACCAACATCACCCGGCACATGGGTGCGCGGGATGTGGATGCGGCGCTGGCAGCGGCAGGCGCGG
AGGCACAGGATTGGGAGGGCGGCACACGGATCGGCGCGTGTCTGGAAAGCTTCAACCGCGACTGGTCGCGCCGGGTGCTC
GGGCGCGGGGCGGTGGTGTTGCTGATCACCGACGGCCTCGACCGCGATGAACCGGAGCGGCTGGAGGCGGCAATGGAACG
TCTGTCCCTGTCATCGCGCCGGGTGATCTGGATCAACCCGCTTCTGCGCTGGGACGGGTTCGCGCCCAAGGCCGCAGGCA
TCCGCGCAATGCTGCCCCATGTGTCCAGCTTCCGTGCGGGGCACAACATCGCGGCCTTGGCAGGGCTGGCCGAGGCCGTC
GCGCGCCCGGACGATCCGGGAGAAAAGGCGCGCCTGATGGCAGCCTTGCGCGAGGCTTGA

Upstream 100 bases:

>100_bases
CCCGGCGGATCTGTGGATCTACGAATAACGCGCAGTGCGATGTCCTGAGGACCGCCCCCGGCCTTGACGTGTCAGGCCGG
GGGCGGTTTCTGTTGGGTCC

Downstream 100 bases:

>100_bases
CCAAAAGGAGCGCGTTCGCGCACGAGATATTTTGCGCGCGGGGCGCGCGGGAGGGGCGCTGCCCCTTATGCGTCCTTTTC
CAAGGAAAAAGACGCAGACC

Product: VWA containing CoxE-like protein

Products: NA

Alternate protein names: VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; VWA Domain Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; CoxE Protein; Von Willebrand Factor Type A Domain-Containing Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLRACFTSRPEHRAVYDQIFRLY
WRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLHGVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQ
MSVAEMAEAKRLIAQMTLSVPPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS
YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEGGTRIGACLESFNRDWSRRVL
GRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINPLLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAV
ARPDDPGEKARLMAALREA

Sequences:

>Translated_419_residues
MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLRACFTSRPEHRAVYDQIFRLY
WRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLHGVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQ
MSVAEMAEAKRLIAQMTLSVPPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS
YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEGGTRIGACLESFNRDWSRRVL
GRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINPLLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAV
ARPDDPGEKARLMAALREA
>Mature_419_residues
MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLRACFTSRPEHRAVYDQIFRLY
WRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLHGVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQ
MSVAEMAEAKRLIAQMTLSVPPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS
YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEGGTRIGACLESFNRDWSRRVL
GRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINPLLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAV
ARPDDPGEKARLMAALREA

Specific function: Unknown

COG id: COG3552

COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46598; Mature: 46598

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLR
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH
ACFTSRPEHRAVYDQIFRLYWRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLH
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQMSVAEMAEAKRLIAQMTLSV
HHHCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHEEECCCCCCHHH
YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC
GTRIGACLESFNRDWSRRVLGRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINP
CHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECC
LLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAVARPDDPGEKARLMAALREA
HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MEYAPLELPDRPQLTRNITHFARALRVAGLPAGPGRVADAIRAVAVAGFSERAEFYYTLR
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHH
ACFTSRPEHRAVYDQIFRLYWRDPQYLEHMMSMLTPAVRGVAEERKIKAGEKRAAEALLH
HHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVERDAPDLPEGEQDGTEIEVDATLTMSREERLKTLDFEQMSVAEMAEAKRLIAQMTLSV
HHHCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PPLMSRRTIAAPHGARPDWRRTMRAAMRRGGDVVEFARRDRRQRWPSLVALCDISGSMSS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHEEECCCCCCHHH
YSRAVLHFLHAVSNQKGAGWAEVHAFTFGTQLTNITRHMGARDVDAALAAAGAEAQDWEG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCC
GTRIGACLESFNRDWSRRVLGRGAVVLLITDGLDRDEPERLEAAMERLSLSSRRVIWINP
CHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECC
LLRWDGFAPKAAGIRAMLPHVSSFRAGHNIAALAGLAEAVARPDDPGEKARLMAALREA
HHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA