Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054244

Identifier: 89054244

GI number: 89054244

Start: 1742866

End: 1743489

Strand: Direct

Name: 89054244

Synonym: Jann_1753

Alternate gene names: NA

Gene position: 1742866-1743489 (Clockwise)

Preceding gene: 89054243

Following gene: 89054245

Centisome position: 40.36

GC content: 62.5

Gene sequence:

>624_bases
ATGGCATGGCATCCTCTGATGATGATGCAAACAGACCTTTGGAGAGAGAAGACGATGCGAACGTTTGTTGCCGTGACTAT
CCTGGCCCTCCCGGCCGCTGCACAGGCCGATTGCGTCTCAGTCGCCGATCTGGCGGAAGGCGTTCGCTTCCATATGGGGG
AGGGGATCTATTGGGAGTTGCAAGGTCAGGGGCAGGACCGCGAGGCGCAATTCCAATGGTCGCCGGACTATCCGATCCAG
GTGATGGACTTTGCCCGCGGCGTTTTCATGGTATCTCTGCAAACCCCGGAAATGGACGCGCCGTGGCAGGCCGAGTTCGC
GCCCGGTGTTGAAAATAGCCCCGCACCAGCCCCGGGGGTGGACTGGCATACGCGGATGACGACGGTGGGCGGCGGGCAGC
GTCGCATGGATGACCTGCACTATGAATGGGGGGCGGCGCAGCGGCTGAGCCTTGGGGATTGCGGCTATGATGTCGTGCCG
TTGGCCCTGCATTCCGTGCCGGTGGGGGGCGAGCTGGCCGGCACCACGTCAGGCTACCTCTACTTCGCGGAATTTGGCGG
CGTGGTGATAACTCACGATGGGTTTGGCACGCGCTGGACCCTCTCCGGGATTACGGCACGATGA

Upstream 100 bases:

>100_bases
CTGACATGCGAGCCCGCGACAGACCTGCCTCTGGCACAGCGCTATTTCATGTATTGATCCATGTGCAACGATGCGGCCCC
GCGCTTGGGGCGCGGTGACC

Downstream 100 bases:

>100_bases
GCTTGGGCATTGCGCATATCCTGCGTCGGGCAGGCACATGGGAGGGGGCCGTCGCGGCCACGGTCGTGCTGGATTATGAG
GGGAGGTTCCTGCGCCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAWHPLMMMQTDLWREKTMRTFVAVTILALPAAAQADCVSVADLAEGVRFHMGEGIYWELQGQGQDREAQFQWSPDYPIQ
VMDFARGVFMVSLQTPEMDAPWQAEFAPGVENSPAPAPGVDWHTRMTTVGGGQRRMDDLHYEWGAAQRLSLGDCGYDVVP
LALHSVPVGGELAGTTSGYLYFAEFGGVVITHDGFGTRWTLSGITAR

Sequences:

>Translated_207_residues
MAWHPLMMMQTDLWREKTMRTFVAVTILALPAAAQADCVSVADLAEGVRFHMGEGIYWELQGQGQDREAQFQWSPDYPIQ
VMDFARGVFMVSLQTPEMDAPWQAEFAPGVENSPAPAPGVDWHTRMTTVGGGQRRMDDLHYEWGAAQRLSLGDCGYDVVP
LALHSVPVGGELAGTTSGYLYFAEFGGVVITHDGFGTRWTLSGITAR
>Mature_206_residues
AWHPLMMMQTDLWREKTMRTFVAVTILALPAAAQADCVSVADLAEGVRFHMGEGIYWELQGQGQDREAQFQWSPDYPIQV
MDFARGVFMVSLQTPEMDAPWQAEFAPGVENSPAPAPGVDWHTRMTTVGGGQRRMDDLHYEWGAAQRLSLGDCGYDVVPL
ALHSVPVGGELAGTTSGYLYFAEFGGVVITHDGFGTRWTLSGITAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22800; Mature: 22669

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWHPLMMMQTDLWREKTMRTFVAVTILALPAAAQADCVSVADLAEGVRFHMGEGIYWEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHEECCCCEEEEE
QGQGQDREAQFQWSPDYPIQVMDFARGVFMVSLQTPEMDAPWQAEFAPGVENSPAPAPGV
ECCCCCCCCEEEECCCCCCHHEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DWHTRMTTVGGGQRRMDDLHYEWGAAQRLSLGDCGYDVVPLALHSVPVGGELAGTTSGYL
CCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCEE
YFAEFGGVVITHDGFGTRWTLSGITAR
EEEECCCEEEEECCCCCEEEECCCCCC
>Mature Secondary Structure 
AWHPLMMMQTDLWREKTMRTFVAVTILALPAAAQADCVSVADLAEGVRFHMGEGIYWEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHEECCCCEEEEE
QGQGQDREAQFQWSPDYPIQVMDFARGVFMVSLQTPEMDAPWQAEFAPGVENSPAPAPGV
ECCCCCCCCEEEECCCCCCHHEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
DWHTRMTTVGGGQRRMDDLHYEWGAAQRLSLGDCGYDVVPLALHSVPVGGELAGTTSGYL
CCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCEE
YFAEFGGVVITHDGFGTRWTLSGITAR
EEEECCCEEEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA