| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ureE [H]
Identifier: 89054245
GI number: 89054245
Start: 1743486
End: 1743992
Strand: Direct
Name: ureE [H]
Synonym: Jann_1754
Alternate gene names: 89054245
Gene position: 1743486-1743992 (Clockwise)
Preceding gene: 89054244
Following gene: 89054246
Centisome position: 40.38
GC content: 66.27
Gene sequence:
>507_bases ATGAGCTTGGGCATTGCGCATATCCTGCGTCGGGCAGGCACATGGGAGGGGGCCGTCGCGGCCACGGTCGTGCTGGATTA TGAGGGGAGGTTCCTGCGCCGCAAGCGTCTGGAGTGTGGCGGCGGGGCTTCCGTAACGGTCGACCTGCCGCACACCGTCT CGGTGGAGCAGGGCGATGCGTTTGAAACAGAAGACGGTGCGTTCATCGACGTGCGCGCAGCACCCGAGCCATTGTTGCGG ATCACCGGCGATCTGGTGCGGCTGGCCTGGCATATCGGCAATCGCCACACACCCTGTCAGGTGGCGGATGACCATCTGCT GATCCGCGCCGATCACGTGTTGGCGGATATGCTGGCGCATCTGGGCGCGGAGGTGGAGGCGACCCAGGCCCCGTTCCGGC CGGAAGGCGGGGCGTATGGCCACGGTCGAACCCATGGCCATTCCCACGGGCCGGGCGAGCATGCGCACGGGCATGATCAT GGACACGACCACGGGCATGATCCGTGA
Upstream 100 bases:
>100_bases GCACCACGTCAGGCTACCTCTACTTCGCGGAATTTGGCGGCGTGGTGATAACTCACGATGGGTTTGGCACGCGCTGGACC CTCTCCGGGATTACGGCACG
Downstream 100 bases:
>100_bases GCGACGGGGCGTTTGACGCGGGCCGGACCGGGGGCCTCTTGCGCCTCAGCCAATGGCTGTCGCCTGCGTTTCCCGTCTCG GCCTACGCCTATTCCCATGG
Product: UreE urease accessory-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSLGIAHILRRAGTWEGAVAATVVLDYEGRFLRRKRLECGGGASVTVDLPHTVSVEQGDAFETEDGAFIDVRAAPEPLLR ITGDLVRLAWHIGNRHTPCQVADDHLLIRADHVLADMLAHLGAEVEATQAPFRPEGGAYGHGRTHGHSHGPGEHAHGHDH GHDHGHDP
Sequences:
>Translated_168_residues MSLGIAHILRRAGTWEGAVAATVVLDYEGRFLRRKRLECGGGASVTVDLPHTVSVEQGDAFETEDGAFIDVRAAPEPLLR ITGDLVRLAWHIGNRHTPCQVADDHLLIRADHVLADMLAHLGAEVEATQAPFRPEGGAYGHGRTHGHSHGPGEHAHGHDH GHDHGHDP >Mature_167_residues SLGIAHILRRAGTWEGAVAATVVLDYEGRFLRRKRLECGGGASVTVDLPHTVSVEQGDAFETEDGAFIDVRAAPEPLLRI TGDLVRLAWHIGNRHTPCQVADDHLLIRADHVLADMLAHLGAEVEATQAPFRPEGGAYGHGRTHGHSHGPGEHAHGHDHG HDHGHDP
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 18094; Mature: 17963
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGIAHILRRAGTWEGAVAATVVLDYEGRFLRRKRLECGGGASVTVDLPHTVSVEQGDA CCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCEEEECCCCC FETEDGAFIDVRAAPEPLLRITGDLVRLAWHIGNRHTPCQVADDHLLIRADHVLADMLAH EECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEHHHHHHHHHHH LGAEVEATQAPFRPEGGAYGHGRTHGHSHGPGEHAHGHDHGHDHGHDP CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLGIAHILRRAGTWEGAVAATVVLDYEGRFLRRKRLECGGGASVTVDLPHTVSVEQGDA CCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCEEEECCCCC FETEDGAFIDVRAAPEPLLRITGDLVRLAWHIGNRHTPCQVADDHLLIRADHVLADMLAH EECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEHHHHHHHHHHH LGAEVEATQAPFRPEGGAYGHGRTHGHSHGPGEHAHGHDHGHDHGHDP CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10648776 [H]