| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054177
Identifier: 89054177
GI number: 89054177
Start: 1669744
End: 1670304
Strand: Direct
Name: 89054177
Synonym: Jann_1686
Alternate gene names: NA
Gene position: 1669744-1670304 (Clockwise)
Preceding gene: 89054176
Following gene: 89054188
Centisome position: 38.67
GC content: 66.31
Gene sequence:
>561_bases ATGACCGAGGTGCTGACGGTCCGGTCCCGTGCGGAGTTGCGGGCATGGCTGGCAGAGCATCATGCCGGGGCGCGCGGCCT TTGGCTGGCCACCTACAAGAAACACCATCCCGATTATCTGCCGTGGATGGAGGCGGTGGAGGAACTACTGTGCTGGGGTT GGGTGGACGCGCAGGTGGCGGGGCTGGATGCGGACCGGATGAAGCACCGGATCGCGCCCCGGAAAGAAACGTCGGCCTGG TCCGCGGTCAATAAGGATGCGGTGGCGCGAATGCGGGCAGAGGGGCGCATGACCTCCGCCGGAGAGGCTAAGATCGCCGC GGCCATGGCCAATGGCATGTGGTCCTTCCTTGATGACGTGGAGCGGTTGGAGGTCCCCGACGATCTGGCGCAGGCCCTTG GCGCGGCGCGGGACATTTGGGACGCCTATCCGCGCTCGGTCAAACGGGGCACGCTCGAATGGATCAAGACCGCAAAGACC GCGCCCACCCGGGCGCGACGGATCGCGGATGTGGCGCAATCGGCCAGCGACGGTCTGCGTCCGACCATTTTCCGACGTTA G
Upstream 100 bases:
>100_bases GCGCGGGCGTGGGTTTCCCGGTGATCCGGCTGGTGCGGTTTTCCATTGGGCCCCATGATATCAGGGACTTACCCCCCGGC ATGTGGCGGGAATTGGCCCC
Downstream 100 bases:
>100_bases GCGAAGCTCATCGCTTTGCGCTGCTTGAGCCGGACGATGATGCCGCCGGTGGACATCAGCATGTAGAACCCCTGGATCAG TGCCGCCGCCAGGTTGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVAGLDADRMKHRIAPRKETSAW SAVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDVERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKT APTRARRIADVAQSASDGLRPTIFRR
Sequences:
>Translated_186_residues MTEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVAGLDADRMKHRIAPRKETSAW SAVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDVERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKT APTRARRIADVAQSASDGLRPTIFRR >Mature_185_residues TEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVAGLDADRMKHRIAPRKETSAWS AVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDVERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKTA PTRARRIADVAQSASDGLRPTIFRR
Specific function: Unknown
COG id: COG4430
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20891; Mature: 20760
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVA CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH GLDADRMKHRIAPRKETSAWSAVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDV CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKTAPTRARRIADVAQSASDGLR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC PTIFRR CCCCCC >Mature Secondary Structure TEVLTVRSRAELRAWLAEHHAGARGLWLATYKKHHPDYLPWMEAVEELLCWGWVDAQVA CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH GLDADRMKHRIAPRKETSAWSAVNKDAVARMRAEGRMTSAGEAKIAAAMANGMWSFLDDV CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ERLEVPDDLAQALGAARDIWDAYPRSVKRGTLEWIKTAKTAPTRARRIADVAQSASDGLR HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC PTIFRR CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA