Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054125

Identifier: 89054125

GI number: 89054125

Start: 1621520

End: 1622071

Strand: Direct

Name: 89054125

Synonym: Jann_1634

Alternate gene names: NA

Gene position: 1621520-1622071 (Clockwise)

Preceding gene: 89054124

Following gene: 89054126

Centisome position: 37.55

GC content: 57.07

Gene sequence:

>552_bases
ATGAAAACAATTTCGTCAAGCGGACTGGAAGTAAAATTCCAGAGGTTCGACAACGAACTGACACTTGATGACGAATTTGT
CATCGAGGGCTATGCGTCGTTGTTTGGGGCTAAGGATCAGGGCGGCGATGTCGTGGAAAAGGGGGCTTATGCAAAGTCTC
TAAATGCGGATCGTCGGGTCAAGATGCTTTGGCAGCATGACCCGAATGAGCCCATCGGGATCTGGGACGAGATTCGCGAA
GACGACCGTGGACTATACGTAAAAGGCCGCTTGCTGGAGTCGGTGTCGCGGGCCCGGGAAGCTGCCGCGCTGACCAAGGC
GGGCGCGATTGACGGGCTGTCTATCGGCTACCGCACGATAAAATCCCACAAGAACGAGAAAGGCGCGCGTTGCCTTTCCG
AAGTGGAGCTTTGGGAGGTGTCGCTTGTGACATTCCCCATGCTTCCCGAAGCGCGATTGGATGCCCATGAGGGCAAATCA
AACGCGCTTCAAGACCTGGCGCAAGTGTTCGAGGACGCCCGCCTGACCCTGGCGGCCCGCAAGGCCCGCTGA

Upstream 100 bases:

>100_bases
AAAACGCCTCTGGCTCGCTGTTTTTGGCGTAGTCTCGGTGATCCTGGCGCAAGGGGTCAACCAGTTACTCAACCTAAATA
TTGGCGGTTAGGAGCCTGAT

Downstream 100 bases:

>100_bases
TCTGTCGATCCCCATCAGGGGAGTAAACTCAACCACAAGGGATATCTCATGACCGAGACCCAGGACCGGGGCGCGAGCAG
CGTACCCATGGCTGAAGTCA

Product: prohead peptidase

Products: NA

Alternate protein names: HK97 Family Phage Prohead Protease; Peptidase; Prohead Peptidase; Caudovirus Prohead Protease; HK97 Family Phage Capsid Protein; Head Maturation Protease; Phage Head Maturation Protease; Phage Prohead Protease And Phage Capsid Protein; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Protease; Phage Pro-Head Protease; Prophage LambdaSa2 Protease

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRVKMLWQHDPNEPIGIWDEIRE
DDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTIKSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKS
NALQDLAQVFEDARLTLAARKAR

Sequences:

>Translated_183_residues
MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRVKMLWQHDPNEPIGIWDEIRE
DDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTIKSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKS
NALQDLAQVFEDARLTLAARKAR
>Mature_183_residues
MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRVKMLWQHDPNEPIGIWDEIRE
DDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTIKSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKS
NALQDLAQVFEDARLTLAARKAR

Specific function: Unknown

COG id: COG3740

COG function: function code R; Phage head maturation protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20410; Mature: 20410

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRV
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCCHHE
KMLWQHDPNEPIGIWDEIREDDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTI
EEEECCCCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKSNALQDLAQVFEDARLTLAAR
HHCCCCHHHHHHHHHHHHHHEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
KAR
CCC
>Mature Secondary Structure
MKTISSSGLEVKFQRFDNELTLDDEFVIEGYASLFGAKDQGGDVVEKGAYAKSLNADRRV
CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCCHHE
KMLWQHDPNEPIGIWDEIREDDRGLYVKGRLLESVSRAREAAALTKAGAIDGLSIGYRTI
EEEECCCCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KSHKNEKGARCLSEVELWEVSLVTFPMLPEARLDAHEGKSNALQDLAQVFEDARLTLAAR
HHCCCCHHHHHHHHHHHHHHEEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
KAR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA