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The map label for this gene is 89054020

Identifier: 89054020

GI number: 89054020

Start: 1498924

End: 1499964

Strand: Direct

Name: 89054020

Synonym: Jann_1529

Alternate gene names: NA

Gene position: 1498924-1499964 (Clockwise)

Preceding gene: 89054019

Following gene: 89054021

Centisome position: 34.71

GC content: 63.69

Gene sequence:

>1041_bases
ATGCGCAGCTCTAAGACCATCCACGTCGTGTCTTGCCATGCCGAAGGCGAAGTGGGCGATGTGATCGTCGGCGGCGTCGC
TCCGCCCCCCGGCAAAACCCTATGGGAGCAGCGCACATGGGTCGCCAAAGACGAGACCTTGCGCAACTTCATGCTAAACG
AGCCACGCGGAGGCGTGTTTCGCCATGTAAACCTGCTCGTGCCGCCGGTTCACCCCGAGGCGCAGATGGGCTGGATCATC
ATGGAGCCAGAGGACACGCCGCCGATGTCGGGGTCGAACTCAATCTGCGTGTCCACGGTACTTTTGGACAGCGGGATCAT
CCCGATGACGGAACCGATCACGGAAATGACCTTGGAAGCCCCCGGCGGGCTTGTCCGCGTGCGGGCCGAATGTGCGAACG
GCAAGGCAGAGCGGATCACCGTGCGCAACGTGCCGTCGTTTGCAGGCGAATTGGGCGTGCCGCTTGATGTGCCAAACCTT
GGCCAGATAAGCGTCGACACAGCCTTTGGCGGCGATAGCTTTGTCGTGGTCGATGCGGCAGCGCTTGGGTTCAAACTGGT
CGCTTCCGAGGCCAAGGCGCTGGCCGACCTCGGCGTCGCGATCACCAACGCGGCCAACGCGCAGCTGACATTCCACCACC
CCGATAACCCTGATTGGCGACACTTCTCTTTCTGTCTGTTCGCCGGGCCCATCACACGGCAAGGCCACCACCTGACCACC
TCCGCCGCCGTGGCCATCCAGCCCGGCAAAATTGACCGCTCGCCGACAGGCACCGCCGCATCTGCCCGTATGGCGCTACT
GCACGCGCGCGGCGAGATGCAGGTGGGGGAGACGCTCACGGCGCGGTCCATCATCAACTCGGAATTCCACGGCCGCATCG
CCGGGACGACACCCGTTGGTGATACCCCTGCGATCATCCCCGAAATCACCGGCCGCGCATGGATCACCGGCACGCACCAA
CACATGCTGGACCCCGATGATCCGTGGCCCGAAGGCTATCGCCTCCGCGATACATGGCCCGACCTGAAGGGGCACACATA
G

Upstream 100 bases:

>100_bases
ACCGGCACCTTCAAACTGTTCCGCATCGGCGATGCCGTGTCGGCCCGCAACACCCACGCCGCCATCTACGACGCCCTGCG
TCTGGTTAAGGATCTCTGAA

Downstream 100 bases:

>100_bases
TGGCGGATATGAACATTCCCTACCTGTCGCAGGACGATTTGATCGGGCTGGGGCTGAGCACGACACAGATCATCGACAGC
ATCGACGACGCCATTCGCGG

Product: proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MRSSKTIHVVSCHAEGEVGDVIVGGVAPPPGKTLWEQRTWVAKDETLRNFMLNEPRGGVFRHVNLLVPPVHPEAQMGWII
MEPEDTPPMSGSNSICVSTVLLDSGIIPMTEPITEMTLEAPGGLVRVRAECANGKAERITVRNVPSFAGELGVPLDVPNL
GQISVDTAFGGDSFVVVDAAALGFKLVASEAKALADLGVAITNAANAQLTFHHPDNPDWRHFSFCLFAGPITRQGHHLTT
SAAVAIQPGKIDRSPTGTAASARMALLHARGEMQVGETLTARSIINSEFHGRIAGTTPVGDTPAIIPEITGRAWITGTHQ
HMLDPDDPWPEGYRLRDTWPDLKGHT

Sequences:

>Translated_346_residues
MRSSKTIHVVSCHAEGEVGDVIVGGVAPPPGKTLWEQRTWVAKDETLRNFMLNEPRGGVFRHVNLLVPPVHPEAQMGWII
MEPEDTPPMSGSNSICVSTVLLDSGIIPMTEPITEMTLEAPGGLVRVRAECANGKAERITVRNVPSFAGELGVPLDVPNL
GQISVDTAFGGDSFVVVDAAALGFKLVASEAKALADLGVAITNAANAQLTFHHPDNPDWRHFSFCLFAGPITRQGHHLTT
SAAVAIQPGKIDRSPTGTAASARMALLHARGEMQVGETLTARSIINSEFHGRIAGTTPVGDTPAIIPEITGRAWITGTHQ
HMLDPDDPWPEGYRLRDTWPDLKGHT
>Mature_346_residues
MRSSKTIHVVSCHAEGEVGDVIVGGVAPPPGKTLWEQRTWVAKDETLRNFMLNEPRGGVFRHVNLLVPPVHPEAQMGWII
MEPEDTPPMSGSNSICVSTVLLDSGIIPMTEPITEMTLEAPGGLVRVRAECANGKAERITVRNVPSFAGELGVPLDVPNL
GQISVDTAFGGDSFVVVDAAALGFKLVASEAKALADLGVAITNAANAQLTFHHPDNPDWRHFSFCLFAGPITRQGHHLTT
SAAVAIQPGKIDRSPTGTAASARMALLHARGEMQVGETLTARSIINSEFHGRIAGTTPVGDTPAIIPEITGRAWITGTHQ
HMLDPDDPWPEGYRLRDTWPDLKGHT

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=340, Percent_Identity=28.2352941176471, Blast_Score=148, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 37074; Mature: 37074

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSKTIHVVSCHAEGEVGDVIVGGVAPPPGKTLWEQRTWVAKDETLRNFMLNEPRGGVF
CCCCCEEEEEEEECCCCCCCEEECCCCCCCCCHHHHCCCEEECHHHHHHHHCCCCCCCEE
RHVNLLVPPVHPEAQMGWIIMEPEDTPPMSGSNSICVSTVLLDSGIIPMTEPITEMTLEA
EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHEEEEC
PGGLVRVRAECANGKAERITVRNVPSFAGELGVPLDVPNLGQISVDTAFGGDSFVVVDAA
CCCEEEEEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEHH
ALGFKLVASEAKALADLGVAITNAANAQLTFHHPDNPDWRHFSFCLFAGPITRQGHHLTT
HHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEC
SAAVAIQPGKIDRSPTGTAASARMALLHARGEMQVGETLTARSIINSEFHGRIAGTTPVG
CEEEEEECCCCCCCCCCCHHHHHEEEEEECCCCCCCCHHHHHHHHCCHHCCEEECCCCCC
DTPAIIPEITGRAWITGTHQHMLDPDDPWPEGYRLRDTWPDLKGHT
CCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure
MRSSKTIHVVSCHAEGEVGDVIVGGVAPPPGKTLWEQRTWVAKDETLRNFMLNEPRGGVF
CCCCCEEEEEEEECCCCCCCEEECCCCCCCCCHHHHCCCEEECHHHHHHHHCCCCCCCEE
RHVNLLVPPVHPEAQMGWIIMEPEDTPPMSGSNSICVSTVLLDSGIIPMTEPITEMTLEA
EEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHEEEEC
PGGLVRVRAECANGKAERITVRNVPSFAGELGVPLDVPNLGQISVDTAFGGDSFVVVDAA
CCCEEEEEEECCCCCEEEEEEECCCCHHHCCCCCCCCCCCCEEEEEEECCCCCEEEEEHH
ALGFKLVASEAKALADLGVAITNAANAQLTFHHPDNPDWRHFSFCLFAGPITRQGHHLTT
HHHHHHHHHHHHHHHHCCEEEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCEEEC
SAAVAIQPGKIDRSPTGTAASARMALLHARGEMQVGETLTARSIINSEFHGRIAGTTPVG
CEEEEEECCCCCCCCCCCHHHHHEEEEEECCCCCCCCHHHHHHHHCCHHCCEEECCCCCC
DTPAIIPEITGRAWITGTHQHMLDPDDPWPEGYRLRDTWPDLKGHT
CCCCCCCCCCCCEEEEECHHHCCCCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]