| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054017
Identifier: 89054017
GI number: 89054017
Start: 1495896
End: 1496177
Strand: Direct
Name: 89054017
Synonym: Jann_1526
Alternate gene names: NA
Gene position: 1495896-1496177 (Clockwise)
Preceding gene: 89054016
Following gene: 89054019
Centisome position: 34.64
GC content: 58.16
Gene sequence:
>282_bases TTGTCGAATGTGTTCGTGGAGGTCGGTACATTCGTGTCCGGCCCTAACCGGACATTCGAAGAAGTCTGCGACGCCGCGTT GCAGCTTCCCCGAAGCGGACCTTCGTCCAAGTCGCAGCATGGAAACGTTATCGACGGCAGCAATGCGGGACGAAGCGACA GTTCGCTGTGTTTGCGCCAACGTCCGCTATTGTGTGACCGGCGCGAGGTCTGGATTGTGCTCAACTGCTCGGAACGACAG ACATGTTCCGCCGTGCAAAAGCGCTCAGAGCTTCAGCGGTGA
Upstream 100 bases:
>100_bases CGTCCTAGACACCGCGCTTGGCTACAACGCAAACTACACTGGCTAGTTCTCCGTTGGTGTAGCTTAGGCCCGGGATCGCA ACTGCGATCCCGGGCCTTCA
Downstream 100 bases:
>100_bases CGTTCTAGGAAAACGTTCGTCTCTGCTTTAGTTGGCGGCTCGCCCGCGAAGATTTCCGCGTATTGGCACCCGGCCCGTGC GCGTTGCAAGCGGGGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSNVFVEVGTFVSGPNRTFEEVCDAALQLPRSGPSSKSQHGNVIDGSNAGRSDSSLCLRQRPLLCDRREVWIVLNCSERQ TCSAVQKRSELQR
Sequences:
>Translated_93_residues MSNVFVEVGTFVSGPNRTFEEVCDAALQLPRSGPSSKSQHGNVIDGSNAGRSDSSLCLRQRPLLCDRREVWIVLNCSERQ TCSAVQKRSELQR >Mature_92_residues SNVFVEVGTFVSGPNRTFEEVCDAALQLPRSGPSSKSQHGNVIDGSNAGRSDSSLCLRQRPLLCDRREVWIVLNCSERQT CSAVQKRSELQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10297; Mature: 10165
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVFVEVGTFVSGPNRTFEEVCDAALQLPRSGPSSKSQHGNVIDGSNAGRSDSSLCLRQ CCCEEEEECCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHC RPLLCDRREVWIVLNCSERQTCSAVQKRSELQR CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure SNVFVEVGTFVSGPNRTFEEVCDAALQLPRSGPSSKSQHGNVIDGSNAGRSDSSLCLRQ CCEEEEECCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHC RPLLCDRREVWIVLNCSERQTCSAVQKRSELQR CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA