Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is ygaZ [C]

Identifier: 89054014

GI number: 89054014

Start: 1492562

End: 1493242

Strand: Direct

Name: ygaZ [C]

Synonym: Jann_1523

Alternate gene names: 89054014

Gene position: 1492562-1493242 (Clockwise)

Preceding gene: 89054011

Following gene: 89054016

Centisome position: 34.57

GC content: 57.12

Gene sequence:

>681_bases
ATGAGACACGGCGCAATTGCTATCCTCCCACTTGCCCTCGGTGCGGCCATTTATGGCTTCGCCTTTGGCCTTCTCGCTGC
CCAAGTTGGCTTCCCCTCGTGGGGTGTCAGCCTGATGAGCGCAACCGTACACGCGGGTTCGTCACAGATCGTCGCTGTTG
AACAGTTTGCCTCAACACAAACCGTGGTCGGTGCTGCATTGGCGGGTGCTGCTTTGAACCTGCGATATATTGGGATCGTT
GCATCGCTGTCGGAGGTTTTGGCAGGGCTGACGTTGAAAGCCAAATTGCTCGCGATCCATATCACCGGCGACGAAAATTG
GGCACTCACCATGGCCGAGCGCGCCAAGTCGCCAGATGTTGGGGCTGCGTTCCTGATCGGCTCAGGTTTTGTGATGATCA
CGGTTTGGACGACCTCAACGACCGCTGGAGCGATAATCGGCGCTGTTCTACCTAATCTTGAGCGCTTCGGACTAGGGTTC
GCTTTTACAGCCGCATTCATTGCAATGGCCCGAGGTCTTTGGCGTGGGAGGCGTCAGTTGATGCCGTGGCTAGTTGCTGC
GGTGGTGACCATCATCGTCGTGTTGCTCGGTACTCCAAAGGCTTACGGGATTGTTGTCGGAACACTGTGCGGTCTAGGTG
TCGCGGGTACGCTGCGAAAGACCACAGGAGCGACGGCATGA

Upstream 100 bases:

>100_bases
CTCTCCTTCTTTGAATTTACCGCTTTCTTGATGTGACTACATCACAAAAATCCACAACTGAACATATATCGTATCACCGG
CTTTCACTAAACCTGTCCTA

Downstream 100 bases:

>100_bases
GCGGCGATCATTGGGCTGTCATTGCGATCTTGGCGGTCGCGGCGTTTTCTATTCGTGTCTTGGGTATGGTCGCTGGTGGC
CGTATTCGCGCGTCTCGGTA

Product: AzlC-like protein

Products: NA

Alternate protein names: Branched-Chain Amino Acid Transporter Protein; Branched-Chain Amino Acid Permease-Like; AzlC Protein; AzlC-Like

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQTVVGAALAGAALNLRYIGIV
ASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDVGAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGF
AFTAAFIAMARGLWRGRRQLMPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA

Sequences:

>Translated_226_residues
MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQTVVGAALAGAALNLRYIGIV
ASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDVGAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGF
AFTAAFIAMARGLWRGRRQLMPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA
>Mature_226_residues
MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQTVVGAALAGAALNLRYIGIV
ASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDVGAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGF
AFTAAFIAMARGLWRGRRQLMPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23081; Mature: 23081

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQ
CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHH
TVVGAALAGAALNLRYIGIVASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEEHHHCCCCCC
GAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGFAFTAAFIAMARGLWRGRRQL
CEEEEECCCEEEEEEEECCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCC
>Mature Secondary Structure
MRHGAIAILPLALGAAIYGFAFGLLAAQVGFPSWGVSLMSATVHAGSSQIVAVEQFASTQ
CCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHH
TVVGAALAGAALNLRYIGIVASLSEVLAGLTLKAKLLAIHITGDENWALTMAERAKSPDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEEHHHCCCCCC
GAAFLIGSGFVMITVWTTSTTAGAIIGAVLPNLERFGLGFAFTAAFIAMARGLWRGRRQL
CEEEEECCCEEEEEEEECCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MPWLVAAVVTIIVVLLGTPKAYGIVVGTLCGLGVAGTLRKTTGATA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA