| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054003
Identifier: 89054003
GI number: 89054003
Start: 1482634
End: 1482828
Strand: Direct
Name: 89054003
Synonym: Jann_1512
Alternate gene names: NA
Gene position: 1482634-1482828 (Clockwise)
Preceding gene: 89054002
Following gene: 89054004
Centisome position: 34.34
GC content: 62.05
Gene sequence:
>195_bases ATGGAGCGTTTGGTCACCAATTTTCTGCGCTTTGTCGCAGGACGCGACGGCGAGCGAGACACAAATATCCACGTCAACCG GATCGCCATGGGCGGCAGTCAGGACCGCGCCCTCGCGGCGTTCAAAGCGGATCAGGCGAAGGTTGCCAGCCGCCAAGACG GGGCGACATTCGCCACGAAACGCGCGGCAAAGTAG
Upstream 100 bases:
>100_bases GCCTCTCTGCAGGGGCCTGTCACACACTGCCTAGATTTTGCCTTATTTGCCCGCCACCCCTGTGGATAAGTCAAAAACAA AAAACAAATGAGGCAGTGTA
Downstream 100 bases:
>100_bases CATCCAGACCTACGGAAAACCCGAAAGGCGCCCTTCGCGGCGCCTTTTTTCTTGCCTGAACCGGATGCCGTGGCGTTAGC TCCGCCCACACTCACGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MERLVTNFLRFVAGRDGERDTNIHVNRIAMGGSQDRALAAFKADQAKVASRQDGATFATKRAAK
Sequences:
>Translated_64_residues MERLVTNFLRFVAGRDGERDTNIHVNRIAMGGSQDRALAAFKADQAKVASRQDGATFATKRAAK >Mature_64_residues MERLVTNFLRFVAGRDGERDTNIHVNRIAMGGSQDRALAAFKADQAKVASRQDGATFATKRAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7008; Mature: 7008
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLVTNFLRFVAGRDGERDTNIHVNRIAMGGSQDRALAAFKADQAKVASRQDGATFATK CHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEHHHCCCHHHHCCCCCCCCCCCC RAAK CCCC >Mature Secondary Structure MERLVTNFLRFVAGRDGERDTNIHVNRIAMGGSQDRALAAFKADQAKVASRQDGATFATK CHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEHHHCCCHHHHCCCCCCCCCCCC RAAK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA