| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89054004
Identifier: 89054004
GI number: 89054004
Start: 1482938
End: 1483537
Strand: Direct
Name: 89054004
Synonym: Jann_1513
Alternate gene names: NA
Gene position: 1482938-1483537 (Clockwise)
Preceding gene: 89054003
Following gene: 89054008
Centisome position: 34.34
GC content: 62.0
Gene sequence:
>600_bases ATGACCTGCAAGACCATTTTCGGCGCAATCGCCGCCTGCCTCACCTTCACCGCCGCAGCGACCGCGAACGTCGAATACGA TTGCGGCGAATATAACAACGCGATCTATTCGATCACCTATTTTGACGAAGAAGATGTGGCCGAGATCCGCGCCGTGGATC TGGCCGGTCAGATGGCGTCCGCCCTGATGCGGCCCGCGATATCCGGCAGCGGCAGCCGCTACGTCTCGGACACCGGAAAC TCCGAGTTTATCGAACATCAGGGCAACGCCTACCTGTTTGTGCAGGGCGTCCAGCTCACTTGCACCGTGTTCGCCGTCAC CGCCCCTGGCGACAATGGGGGCGGCTTCGCGGCCGTTCCGCTCAATATCCCCGCCTATTCCTATGGCGGCAACCTGCGCA GCGGTCCCGGCATGCAATTCGGCACCCTGGGCAGCCTGCCCGAGGGCACGACGATCACCATTATCGAGGAGACGGGCATT TATATGGGCGACCACCAATGGTTTGGCGTGCGGCTCTTCAATGGCCAGACCGCCTATCACTGGGGCGGCATCATCTGCGC CTCGGGCGCGCCGCTGAACGGTGTCTTCACAGGCTGCTGA
Upstream 100 bases:
>100_bases CTACGGAAAACCCGAAAGGCGCCCTTCGCGGCGCCTTTTTTCTTGCCTGAACCGGATGCCGTGGCGTTAGCTCCGCCCAC ACTCACGAAAGACGGATTTC
Downstream 100 bases:
>100_bases GGGGGCCTTTAGCAGGTTAATTTTCGGTTAACGAAAATCGGAAAAACGAGGTATACCAATAGCCTGACCCCCGGTTGCAA GCGTGCAACCCTCAGGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTCKTIFGAIAACLTFTAAATANVEYDCGEYNNAIYSITYFDEEDVAEIRAVDLAGQMASALMRPAISGSGSRYVSDTGN SEFIEHQGNAYLFVQGVQLTCTVFAVTAPGDNGGGFAAVPLNIPAYSYGGNLRSGPGMQFGTLGSLPEGTTITIIEETGI YMGDHQWFGVRLFNGQTAYHWGGIICASGAPLNGVFTGC
Sequences:
>Translated_199_residues MTCKTIFGAIAACLTFTAAATANVEYDCGEYNNAIYSITYFDEEDVAEIRAVDLAGQMASALMRPAISGSGSRYVSDTGN SEFIEHQGNAYLFVQGVQLTCTVFAVTAPGDNGGGFAAVPLNIPAYSYGGNLRSGPGMQFGTLGSLPEGTTITIIEETGI YMGDHQWFGVRLFNGQTAYHWGGIICASGAPLNGVFTGC >Mature_198_residues TCKTIFGAIAACLTFTAAATANVEYDCGEYNNAIYSITYFDEEDVAEIRAVDLAGQMASALMRPAISGSGSRYVSDTGNS EFIEHQGNAYLFVQGVQLTCTVFAVTAPGDNGGGFAAVPLNIPAYSYGGNLRSGPGMQFGTLGSLPEGTTITIIEETGIY MGDHQWFGVRLFNGQTAYHWGGIICASGAPLNGVFTGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20880; Mature: 20748
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCKTIFGAIAACLTFTAAATANVEYDCGEYNNAIYSITYFDEEDVAEIRAVDLAGQMAS CCHHHHHHHHHHHHHHHHHEECCCEECCCCCCCEEEEEEEECCCCHHHHEEHHHHHHHHH ALMRPAISGSGSRYVSDTGNSEFIEHQGNAYLFVQGVQLTCTVFAVTAPGDNGGGFAAVP HHHHHCCCCCCCEEEECCCCCCEEEECCCEEEEEECCEEEEEEEEEECCCCCCCCEEEEE LNIPAYSYGGNLRSGPGMQFGTLGSLPEGTTITIIEETGIYMGDHQWFGVRLFNGQTAYH EECCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCEEEEEEEECCCEEEE WGGIICASGAPLNGVFTGC ECCEEEECCCCCCCEEECC >Mature Secondary Structure TCKTIFGAIAACLTFTAAATANVEYDCGEYNNAIYSITYFDEEDVAEIRAVDLAGQMAS CHHHHHHHHHHHHHHHHHEECCCEECCCCCCCEEEEEEEECCCCHHHHEEHHHHHHHHH ALMRPAISGSGSRYVSDTGNSEFIEHQGNAYLFVQGVQLTCTVFAVTAPGDNGGGFAAVP HHHHHCCCCCCCEEEECCCCCCEEEECCCEEEEEECCEEEEEEEEEECCCCCCCCEEEEE LNIPAYSYGGNLRSGPGMQFGTLGSLPEGTTITIIEETGIYMGDHQWFGVRLFNGQTAYH EECCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEECCCEEEEEEEECCCEEEE WGGIICASGAPLNGVFTGC ECCEEEECCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA