| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053978
Identifier: 89053978
GI number: 89053978
Start: 1457159
End: 1457554
Strand: Reverse
Name: 89053978
Synonym: Jann_1487
Alternate gene names: NA
Gene position: 1457554-1457159 (Counterclockwise)
Preceding gene: 89053979
Following gene: 89053977
Centisome position: 33.76
GC content: 56.57
Gene sequence:
>396_bases ATGAACCAACGCCCGGACGCGCCCAATGAGCTGGCGATCACGTTCCTTTATTACAAGGATCTTGATAGGGCAGAGGCCTT TTACCGCGATGTGATGGGCTTTCCTTTGGTTATTAATCAGCAGGGCTTGGCCAAGATCATGCGGGTCTGTCCCGGCGCGC ATATTGGCCTCGTCGACGAAGCTCATGGCATGCACAAATGGGCCGAGACCCGCCCCGTTCAGTTCTGCGTTCGGGTGCCG GATGTCGATGCCTGGTACAGCTACATCGGTGCACAAGACGTTGAAAACCTGAGCGAATTGTTCGTGAACGACGCCATAGG CATCCGCGCATTCGTGTTTGATGATCCGGAGGGCTATCAGGTGGAGATCCAGACCGCCACACGGCCTGACGCCTGA
Upstream 100 bases:
>100_bases GTTGGCCAGTAAATGTTTTCTTGCGCGGGCAGCGGATCGTGAGAGACGGAGCGCTCACTGCCCACCCTGGCCAAGGCCGC TGGATTGATCGGAGACCCAC
Downstream 100 bases:
>100_bases GGCATCGTCATGGACCAGGCACAAAATCTTTATGTGATTAACCCTAATTCCTCGGACGCGGTGACCCGTGAAATAGGGGA GGCCATCACACCTTTGGACG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MNQRPDAPNELAITFLYYKDLDRAEAFYRDVMGFPLVINQQGLAKIMRVCPGAHIGLVDEAHGMHKWAETRPVQFCVRVP DVDAWYSYIGAQDVENLSELFVNDAIGIRAFVFDDPEGYQVEIQTATRPDA
Sequences:
>Translated_131_residues MNQRPDAPNELAITFLYYKDLDRAEAFYRDVMGFPLVINQQGLAKIMRVCPGAHIGLVDEAHGMHKWAETRPVQFCVRVP DVDAWYSYIGAQDVENLSELFVNDAIGIRAFVFDDPEGYQVEIQTATRPDA >Mature_131_residues MNQRPDAPNELAITFLYYKDLDRAEAFYRDVMGFPLVINQQGLAKIMRVCPGAHIGLVDEAHGMHKWAETRPVQFCVRVP DVDAWYSYIGAQDVENLSELFVNDAIGIRAFVFDDPEGYQVEIQTATRPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14865; Mature: 14865
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRPDAPNELAITFLYYKDLDRAEAFYRDVMGFPLVINQQGLAKIMRVCPGAHIGLVDE CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCEECCCC AHGMHKWAETRPVQFCVRVPDVDAWYSYIGAQDVENLSELFVNDAIGIRAFVFDDPEGYQ CCCHHHHHHCCCEEEEEECCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCCCE VEIQTATRPDA EEEEECCCCCC >Mature Secondary Structure MNQRPDAPNELAITFLYYKDLDRAEAFYRDVMGFPLVINQQGLAKIMRVCPGAHIGLVDE CCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCEECCCC AHGMHKWAETRPVQFCVRVPDVDAWYSYIGAQDVENLSELFVNDAIGIRAFVFDDPEGYQ CCCHHHHHHCCCEEEEEECCCHHHHHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCCCE VEIQTATRPDA EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA