| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is hyuE [H]
Identifier: 89053977
GI number: 89053977
Start: 1456460
End: 1457149
Strand: Reverse
Name: hyuE [H]
Synonym: Jann_1486
Alternate gene names: 89053977
Gene position: 1457149-1456460 (Counterclockwise)
Preceding gene: 89053978
Following gene: 89053976
Centisome position: 33.75
GC content: 58.12
Gene sequence:
>690_bases ATGGACCAGGCACAAAATCTTTATGTGATTAACCCTAATTCCTCGGACGCGGTGACCCGTGAAATAGGGGAGGCCATCAC ACCTTTGGACGGAATGGGACATCGCATCATTTGCGTGACCAATCGAAGCGGTCCCCCCGGGATCGAAAGCCAAGCACAAG CGGATTTGACCATTCCACAAACGCTGGATCTGGCGGCGGAGGTCGATAAAGATGCTGCCGGGTTTGTGATTGCCTGTTTC GGCGATCCCGGTCTCCATGCCTTGCGGGATCGGACCGCCAAGCCGGTTCTTGGCATCCAGGAAAGTGCCATCACGACCGC GCTCACCTTGGGGCAACGCTTTGGCATCATTGCGATTTTACCAAACTCGATCCCACGCCACTTGCGCAGCATAGGCGCGA TGGGACTGCAAAGCCGTCTTGCCGGGGACCGCGCGCTGAACCTCGGCGTCACTGATCTGGCGGACGCCGACCAAACCCTG AGCCGGATGATGCAAGTCGGGGAAACGCTCATTCACCAAGACGGGGCGGACGTACTGATCATGGGGTGCGCAGGGATGGC CCGGTTCCGGAAGCCTCTGGAACGGGATCTTGGCGTGCCTGTTGTCGAGCCGTGTCAAGCCGCTGTTGCCATCGCCCTCA CCCGTATTCGCTTGAAACAAAGTCATAAAACGGAACCCTCCCATGATTGA
Upstream 100 bases:
>100_bases GAACGACGCCATAGGCATCCGCGCATTCGTGTTTGATGATCCGGAGGGCTATCAGGTGGAGATCCAGACCGCCACACGGC CTGACGCCTGAGGCATCGTC
Downstream 100 bases:
>100_bases TGAGACCACCTCAGGCGTCTTTACCATCGCGGCGACGCCGTTTTTGCCCGATGGCGCATTGGATCTGGCGAGCGTCGACA CGATGGTTGATTTCTACGCC
Product: Asp/Glu racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MDQAQNLYVINPNSSDAVTREIGEAITPLDGMGHRIICVTNRSGPPGIESQAQADLTIPQTLDLAAEVDKDAAGFVIACF GDPGLHALRDRTAKPVLGIQESAITTALTLGQRFGIIAILPNSIPRHLRSIGAMGLQSRLAGDRALNLGVTDLADADQTL SRMMQVGETLIHQDGADVLIMGCAGMARFRKPLERDLGVPVVEPCQAAVAIALTRIRLKQSHKTEPSHD
Sequences:
>Translated_229_residues MDQAQNLYVINPNSSDAVTREIGEAITPLDGMGHRIICVTNRSGPPGIESQAQADLTIPQTLDLAAEVDKDAAGFVIACF GDPGLHALRDRTAKPVLGIQESAITTALTLGQRFGIIAILPNSIPRHLRSIGAMGLQSRLAGDRALNLGVTDLADADQTL SRMMQVGETLIHQDGADVLIMGCAGMARFRKPLERDLGVPVVEPCQAAVAIALTRIRLKQSHKTEPSHD >Mature_229_residues MDQAQNLYVINPNSSDAVTREIGEAITPLDGMGHRIICVTNRSGPPGIESQAQADLTIPQTLDLAAEVDKDAAGFVIACF GDPGLHALRDRTAKPVLGIQESAITTALTLGQRFGIIAILPNSIPRHLRSIGAMGLQSRLAGDRALNLGVTDLADADQTL SRMMQVGETLIHQDGADVLIMGCAGMARFRKPLERDLGVPVVEPCQAAVAIALTRIRLKQSHKTEPSHD
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 24383; Mature: 24383
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQAQNLYVINPNSSDAVTREIGEAITPLDGMGHRIICVTNRSGPPGIESQAQADLTIPQ CCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCH TLDLAAEVDKDAAGFVIACFGDPGLHALRDRTAKPVLGIQESAITTALTLGQRFGIIAIL HHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEC PNSIPRHLRSIGAMGLQSRLAGDRALNLGVTDLADADQTLSRMMQVGETLIHQDGADVLI CCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEE MGCAGMARFRKPLERDLGVPVVEPCQAAVAIALTRIRLKQSHKTEPSHD ECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDQAQNLYVINPNSSDAVTREIGEAITPLDGMGHRIICVTNRSGPPGIESQAQADLTIPQ CCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCH TLDLAAEVDKDAAGFVIACFGDPGLHALRDRTAKPVLGIQESAITTALTLGQRFGIIAIL HHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEC PNSIPRHLRSIGAMGLQSRLAGDRALNLGVTDLADADQTLSRMMQVGETLIHQDGADVLI CCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEE MGCAGMARFRKPLERDLGVPVVEPCQAAVAIALTRIRLKQSHKTEPSHD ECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]