| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is cutL [H]
Identifier: 89053943
GI number: 89053943
Start: 1421389
End: 1423494
Strand: Direct
Name: cutL [H]
Synonym: Jann_1452
Alternate gene names: 89053943
Gene position: 1421389-1423494 (Clockwise)
Preceding gene: 89053941
Following gene: 89053944
Centisome position: 32.92
GC content: 68.8
Gene sequence:
>2106_bases ATGCTGGACCGTTCGACCCATGTGATTGGTGCCTCTCCGGGGGATCGCCGCGCTGCCGTCAGGCTGCGGGGGCAGGGCTG CTTTGCGGGCGATGTGGCCCTGCACGATCCTTTGCATCTGGCCTTTGCCCGCAGCGCCGTGCCGGAGGGGGATCTGGCCC CGGTGGACATCGACGACGCGCTGGATCTGCCCGGTGTCCTAGCCGTTCACGCCGGTTGTGACGTGTCCGGCTTGGGCGCT TTGTCGGTGAACCCCGTCCTGCCGCTGCCCGTGCCGCCCGCCTATCCGATCCTGGCCGGGGGCCGCGTGGAGTGGTTGGG GCAGCCGATTGCCGGAATCCTCGCCGACACGCCCCAGGCCGCGTTGGACGGCGCGGAGGCGGTGTGGGCAGATGTCGCTG AAACGGAGACGACGCCCCAGCCCCTTGCGACCAAAAGCTGGCGCACCGGTGATCCGGCGCAGGCCTTCGCCCAGGCCGCC CATGTGGTGGAGGTGGCGGTCAACCACCCCCGTCTGGCCCCTTGTCCGTTGGAGCCGCGCGCGATTGCGGTGGACTGGGC GGAGAAGGGGCTGACGATCTGGCTATCCACGCAGACGCCGCACCGGGCCCGGTCGGAGCTGGCGCAGATCCTGGGTGTCG ATGCGGAGACGTTAAGGGTGATCGCGCCCGATGTGGGGGGCGCGTTCGGGATGAAGGGCTCCCTGTATCCGGAGGAGGTT TTTGCCGTCTGGGCGGCCCTGCACCACCGCCGTTCTGTGCGTTGGTGCGCCACACGGGGCGAGGATTTCCTGTCGGCCAC CCACGGGCGCGGGTTGAGCACGCGGGGGCGATTGGCGGTGGCGCGCGACGGCACATTCCTTGCGCTGGAGGCGCGGGTCG ATGCACCTTTGGGGGCCTGGGTGCCGAATTCGGGCCTGGTGCCAGCCTGGAACGCGGCGCGGATCCTGCCGTGCGGCTAT GATATTCCGACGGTGGACATCCAGACCTCTGCCACGCCCGGGCACCGCGCGCCCACGGGGATCTATCGCGGCGCTGGCCG GCCCGAGGCCGCCTGCCTGATGGAGCGTCTGGCCGATGCGGCGGCGCGCGCCACAGGCGTTGATCCGCTGGAGATCCGGG CACGCAATGTCCATGGATCGGGCACGCTGCCGGTGCGAACCGCGACGGGCAACCTGCTGGATTCCGGCGATTATCCTGCG GCCTTGGCGGGGGCTGCGACGGCGGCCGATTATCGCGCATTGCAGGCAAAGCGGACGCGCAAACGCACGTTGGGCCATCT GTCGGGCATCGGCGTGGCCTTCTATCTGGAGCCTTCGGGCGAGGGGTTCGAGACGGCGCGCGTGACCTGGACGGATGCAG GCGTGGAGATCGCAAGCGGCTCCTCCAGCCAGGGACACGGGCGGGAGACGGCCTATGCCCAGATCGCCTCGGACGTGTTG CAAATCGCGTCGGGCGATGTGGAGGTTTTGCAGGGCGACACGGCGACCTGCCCGGCGGGGATCGGGGCCGTTGCCTCACG CGGGACGGCGATTGGCGGCAGTGCGGTGTTCGTGGCCTGTGAGCGCCTTCGCGCACGGCATCTGAGTGGAGAGCCCCTGC CGCTGACCGAGGATATCCGGTATGAGAATGAAGGGCAGGCCTGGGGTTATGGCGTCACCCTGGTGGCCGCCGATGTGGAT CGCGAGACGGGGGCCGTGGCGATCACCCATGTCACCTGTTTTGACGATGCGGGCCGTTTGGTGAACCCGGCCTTCGTGGA GGGGCAGATCCGGGGCGGCTTTGCCCAAGGTCTGGGCGAGGCGATGATGGAGGCGGTGGTCTATGACGATGACGGGCAGT TGCTGACCGGGAGCCTGATGGATTACGCCCTGCCACGCGCCACGGACATGCCCGGGATCTCGATCCACGGGTCCGAGCAT CCCACATCGCTGAACGCGCTTGGGGTGAAGGGCGTGGGGGAGGCGGGCACTATCGGGGCCCCGCCTGCGATCCTGGGCGC GGTTCTGGACGCGCTGGCCCCGCTGGGCGTAACGGATCTGGATATGCCGCTGACGCCTTGCAAGATTTGGTCCGCCATTC AGGCGGCGGAGAGGGATGTTTCATGA
Upstream 100 bases:
>100_bases GGACCACCCCTAGCAGTCCGCGCGCCTGTCGCCCAAAAGTTTCCCGATCCATGCCGGGATTTGGTTTTCGAATCCTCGGG TTCATGGTTGATTTGCCGCG
Downstream 100 bases:
>100_bases AATACAATCGCTTGGACGCCAAAGATCATGCCCGTGAGCATTTCAACGGGATCTGGGCGGCGTGCCTGAACCCTTGGCGA CCCGACGGGGCGTTCGATGA
Product: molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MLDRSTHVIGASPGDRRAAVRLRGQGCFAGDVALHDPLHLAFARSAVPEGDLAPVDIDDALDLPGVLAVHAGCDVSGLGA LSVNPVLPLPVPPAYPILAGGRVEWLGQPIAGILADTPQAALDGAEAVWADVAETETTPQPLATKSWRTGDPAQAFAQAA HVVEVAVNHPRLAPCPLEPRAIAVDWAEKGLTIWLSTQTPHRARSELAQILGVDAETLRVIAPDVGGAFGMKGSLYPEEV FAVWAALHHRRSVRWCATRGEDFLSATHGRGLSTRGRLAVARDGTFLALEARVDAPLGAWVPNSGLVPAWNAARILPCGY DIPTVDIQTSATPGHRAPTGIYRGAGRPEAACLMERLADAAARATGVDPLEIRARNVHGSGTLPVRTATGNLLDSGDYPA ALAGAATAADYRALQAKRTRKRTLGHLSGIGVAFYLEPSGEGFETARVTWTDAGVEIASGSSSQGHGRETAYAQIASDVL QIASGDVEVLQGDTATCPAGIGAVASRGTAIGGSAVFVACERLRARHLSGEPLPLTEDIRYENEGQAWGYGVTLVAADVD RETGAVAITHVTCFDDAGRLVNPAFVEGQIRGGFAQGLGEAMMEAVVYDDDGQLLTGSLMDYALPRATDMPGISIHGSEH PTSLNALGVKGVGEAGTIGAPPAILGAVLDALAPLGVTDLDMPLTPCKIWSAIQAAERDVS
Sequences:
>Translated_701_residues MLDRSTHVIGASPGDRRAAVRLRGQGCFAGDVALHDPLHLAFARSAVPEGDLAPVDIDDALDLPGVLAVHAGCDVSGLGA LSVNPVLPLPVPPAYPILAGGRVEWLGQPIAGILADTPQAALDGAEAVWADVAETETTPQPLATKSWRTGDPAQAFAQAA HVVEVAVNHPRLAPCPLEPRAIAVDWAEKGLTIWLSTQTPHRARSELAQILGVDAETLRVIAPDVGGAFGMKGSLYPEEV FAVWAALHHRRSVRWCATRGEDFLSATHGRGLSTRGRLAVARDGTFLALEARVDAPLGAWVPNSGLVPAWNAARILPCGY DIPTVDIQTSATPGHRAPTGIYRGAGRPEAACLMERLADAAARATGVDPLEIRARNVHGSGTLPVRTATGNLLDSGDYPA ALAGAATAADYRALQAKRTRKRTLGHLSGIGVAFYLEPSGEGFETARVTWTDAGVEIASGSSSQGHGRETAYAQIASDVL QIASGDVEVLQGDTATCPAGIGAVASRGTAIGGSAVFVACERLRARHLSGEPLPLTEDIRYENEGQAWGYGVTLVAADVD RETGAVAITHVTCFDDAGRLVNPAFVEGQIRGGFAQGLGEAMMEAVVYDDDGQLLTGSLMDYALPRATDMPGISIHGSEH PTSLNALGVKGVGEAGTIGAPPAILGAVLDALAPLGVTDLDMPLTPCKIWSAIQAAERDVS >Mature_701_residues MLDRSTHVIGASPGDRRAAVRLRGQGCFAGDVALHDPLHLAFARSAVPEGDLAPVDIDDALDLPGVLAVHAGCDVSGLGA LSVNPVLPLPVPPAYPILAGGRVEWLGQPIAGILADTPQAALDGAEAVWADVAETETTPQPLATKSWRTGDPAQAFAQAA HVVEVAVNHPRLAPCPLEPRAIAVDWAEKGLTIWLSTQTPHRARSELAQILGVDAETLRVIAPDVGGAFGMKGSLYPEEV FAVWAALHHRRSVRWCATRGEDFLSATHGRGLSTRGRLAVARDGTFLALEARVDAPLGAWVPNSGLVPAWNAARILPCGY DIPTVDIQTSATPGHRAPTGIYRGAGRPEAACLMERLADAAARATGVDPLEIRARNVHGSGTLPVRTATGNLLDSGDYPA ALAGAATAADYRALQAKRTRKRTLGHLSGIGVAFYLEPSGEGFETARVTWTDAGVEIASGSSSQGHGRETAYAQIASDVL QIASGDVEVLQGDTATCPAGIGAVASRGTAIGGSAVFVACERLRARHLSGEPLPLTEDIRYENEGQAWGYGVTLVAADVD RETGAVAITHVTCFDDAGRLVNPAFVEGQIRGGFAQGLGEAMMEAVVYDDDGQLLTGSLMDYALPRATDMPGISIHGSEH PTSLNALGVKGVGEAGTIGAPPAILGAVLDALAPLGVTDLDMPLTPCKIWSAIQAAERDVS
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI91823271, Length=749, Percent_Identity=23.3644859813084, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI71773480, Length=745, Percent_Identity=23.8926174496644, Blast_Score=126, Evalue=6e-29, Organism=Escherichia coli, GI1789246, Length=600, Percent_Identity=28.5, Blast_Score=174, Evalue=2e-44, Organism=Escherichia coli, GI1789230, Length=759, Percent_Identity=25.6916996047431, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI1786478, Length=709, Percent_Identity=26.0930888575458, Blast_Score=112, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17540638, Length=719, Percent_Identity=24.6175243393602, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17539860, Length=702, Percent_Identity=20.7977207977208, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI17737937, Length=707, Percent_Identity=24.3281471004243, Blast_Score=117, Evalue=3e-26, Organism=Drosophila melanogaster, GI24647199, Length=701, Percent_Identity=23.5378031383738, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24647201, Length=731, Percent_Identity=23.2558139534884, Blast_Score=99, Evalue=7e-21, Organism=Drosophila melanogaster, GI24647195, Length=670, Percent_Identity=23.8805970149254, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI24647197, Length=670, Percent_Identity=23.8805970149254, Blast_Score=96, Evalue=8e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 72784; Mature: 72784
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRSTHVIGASPGDRRAAVRLRGQGCFAGDVALHDPLHLAFARSAVPEGDLAPVDIDDA CCCCCCEEEECCCCCCEEEEEEECCCCEECCCEECCCHHHHHHHHCCCCCCCCCCCCHHC LDLPGVLAVHAGCDVSGLGALSVNPVLPLPVPPAYPILAGGRVEWLGQPIAGILADTPQA CCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCEEECCCHHCCCCCHHHHHCCCCHH ALDGAEAVWADVAETETTPQPLATKSWRTGDPAQAFAQAAHVVEVAVNHPRLAPCPLEPR HHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCC AIAVDWAEKGLTIWLSTQTPHRARSELAQILGVDAETLRVIAPDVGGAFGMKGSLYPEEV EEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCHHHH FAVWAALHHRRSVRWCATRGEDFLSATHGRGLSTRGRLAVARDGTFLALEARVDAPLGAW HHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCCCCCCEEEEECCEEEEEEEECCCCCCCC VPNSGLVPAWNAARILPCGYDIPTVDIQTSATPGHRAPTGIYRGAGRPEAACLMERLADA CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHH AARATGVDPLEIRARNVHGSGTLPVRTATGNLLDSGDYPAALAGAATAADYRALQAKRTR HHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KRTLGHLSGIGVAFYLEPSGEGFETARVTWTDAGVEIASGSSSQGHGRETAYAQIASDVL HHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHH QIASGDVEVLQGDTATCPAGIGAVASRGTAIGGSAVFVACERLRARHLSGEPLPLTEDIR HHHCCCEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC YENEGQAWGYGVTLVAADVDRETGAVAITHVTCFDDAGRLVNPAFVEGQIRGGFAQGLGE CCCCCCEEECEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEECEECCCHHHHHHH AMMEAVVYDDDGQLLTGSLMDYALPRATDMPGISIHGSEHPTSLNALGVKGVGEAGTIGA HHHHHEEECCCCCEEECHHHHHHCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCC PPAILGAVLDALAPLGVTDLDMPLTPCKIWSAIQAAERDVS CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MLDRSTHVIGASPGDRRAAVRLRGQGCFAGDVALHDPLHLAFARSAVPEGDLAPVDIDDA CCCCCCEEEECCCCCCEEEEEEECCCCEECCCEECCCHHHHHHHHCCCCCCCCCCCCHHC LDLPGVLAVHAGCDVSGLGALSVNPVLPLPVPPAYPILAGGRVEWLGQPIAGILADTPQA CCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCCCEEECCCHHCCCCCHHHHHCCCCHH ALDGAEAVWADVAETETTPQPLATKSWRTGDPAQAFAQAAHVVEVAVNHPRLAPCPLEPR HHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCC AIAVDWAEKGLTIWLSTQTPHRARSELAQILGVDAETLRVIAPDVGGAFGMKGSLYPEEV EEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCHHHH FAVWAALHHRRSVRWCATRGEDFLSATHGRGLSTRGRLAVARDGTFLALEARVDAPLGAW HHHHHHHHHCCCEEEECCCCCHHHHHHCCCCCCCCCCEEEEECCEEEEEEEECCCCCCCC VPNSGLVPAWNAARILPCGYDIPTVDIQTSATPGHRAPTGIYRGAGRPEAACLMERLADA CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHH AARATGVDPLEIRARNVHGSGTLPVRTATGNLLDSGDYPAALAGAATAADYRALQAKRTR HHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KRTLGHLSGIGVAFYLEPSGEGFETARVTWTDAGVEIASGSSSQGHGRETAYAQIASDVL HHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHH QIASGDVEVLQGDTATCPAGIGAVASRGTAIGGSAVFVACERLRARHLSGEPLPLTEDIR HHHCCCEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC YENEGQAWGYGVTLVAADVDRETGAVAITHVTCFDDAGRLVNPAFVEGQIRGGFAQGLGE CCCCCCEEECEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEECEECCCHHHHHHH AMMEAVVYDDDGQLLTGSLMDYALPRATDMPGISIHGSEHPTSLNALGVKGVGEAGTIGA HHHHHEEECCCCCEEECHHHHHHCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCC PPAILGAVLDALAPLGVTDLDMPLTPCKIWSAIQAAERDVS CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]