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The map label for this gene is dapA [H]

Identifier: 89053944

GI number: 89053944

Start: 1423491

End: 1424444

Strand: Direct

Name: dapA [H]

Synonym: Jann_1453

Alternate gene names: 89053944

Gene position: 1423491-1424444 (Clockwise)

Preceding gene: 89053943

Following gene: 89053947

Centisome position: 32.97

GC content: 60.17

Gene sequence:

>954_bases
ATGAAATACAATCGCTTGGACGCCAAAGATCATGCCCGTGAGCATTTCAACGGGATCTGGGCGGCGTGCCTGAACCCTTG
GCGACCCGACGGGGCGTTCGATGAGGACGGGTTCCGGTCCAACATCCGCCATTGGGTGGACGATCTGGCGATTTCGGGCC
TGTTTATCGCAGGCAAGCAGGGAGAGTTCTTCTCCATGACGCTGGAGGAGCGCAAGCGCAACATCGAGGTCGCCGTCGAC
GAATGCGGGGGTCAGGCGGGCACGATCTTTTCAGCCTCAGACCAGAATTTCGAGACGGTGGTGGAGCTGGCCCTGCACGC
GCAGAATTGTGGCGCGGATTATGTTGTCGTCCACGCGCCGGTCCTGCATTTCGTGAGTGATCCCGATGAGATCTTGTACG
AATATTACAAGGCGATTTGCGAGCGCGTGGACATTGGCATCGCCATGTGGAGCCACCCGGACAGCGGCTACCTGATGTCG
CCGCAGCTTTGCGCGCGGATCGCCGAGCTGCCCAATATCGTGGCGATCAAATACTCCGTCCCGCGTCCGCTCTATGTGGA
GTTGACGCAGTTGGCCGGTGACAAGATCCATGTCTCCACCGCCGATGAGGGGGCATGGTTGGATAATATCGAGGAACTGG
GATGGCGGCTTTATCTGTGTTCATCGCCGCCCTATCAGATCCAGTCCAAGGTGGATCAGCGGATGAACGAGTATACGCGG
CTGGCCTTTGAAGGGAACTTTGCCGAGGCCCGCCAGGTGCGTGATAGCCTTGACCCAGTGCGCGAGGCGTTCAAACGCAC
GAAGCCGGCGGATAAACCCCAGGCTCATGGCAAATACTGGCAGGAATTGCTGGGGCAGGTCGGCGGCGGTGTACGCCCCC
CGATGCTGAACCTGACCGAGGCGGAGAAAGCTGCCACGCGCGCGGCCTTCGCGGCAAGCGGCTTGCGTGTGTGA

Upstream 100 bases:

>100_bases
TTCTGGACGCGCTGGCCCCGCTGGGCGTAACGGATCTGGATATGCCGCTGACGCCTTGCAAGATTTGGTCCGCCATTCAG
GCGGCGGAGAGGGATGTTTC

Downstream 100 bases:

>100_bases
GCTAGGCGCCGCGTTCAAACAGCTCTTTGTTGCGGCAATGGGGCAGGGGAGATGAGATCCGGGGGCTGTCCATGACCTGC
TTCTGACATTCTTGTTGATA

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKYNRLDAKDHAREHFNGIWAACLNPWRPDGAFDEDGFRSNIRHWVDDLAISGLFIAGKQGEFFSMTLEERKRNIEVAVD
ECGGQAGTIFSASDQNFETVVELALHAQNCGADYVVVHAPVLHFVSDPDEILYEYYKAICERVDIGIAMWSHPDSGYLMS
PQLCARIAELPNIVAIKYSVPRPLYVELTQLAGDKIHVSTADEGAWLDNIEELGWRLYLCSSPPYQIQSKVDQRMNEYTR
LAFEGNFAEARQVRDSLDPVREAFKRTKPADKPQAHGKYWQELLGQVGGGVRPPMLNLTEAEKAATRAAFAASGLRV

Sequences:

>Translated_317_residues
MKYNRLDAKDHAREHFNGIWAACLNPWRPDGAFDEDGFRSNIRHWVDDLAISGLFIAGKQGEFFSMTLEERKRNIEVAVD
ECGGQAGTIFSASDQNFETVVELALHAQNCGADYVVVHAPVLHFVSDPDEILYEYYKAICERVDIGIAMWSHPDSGYLMS
PQLCARIAELPNIVAIKYSVPRPLYVELTQLAGDKIHVSTADEGAWLDNIEELGWRLYLCSSPPYQIQSKVDQRMNEYTR
LAFEGNFAEARQVRDSLDPVREAFKRTKPADKPQAHGKYWQELLGQVGGGVRPPMLNLTEAEKAATRAAFAASGLRV
>Mature_317_residues
MKYNRLDAKDHAREHFNGIWAACLNPWRPDGAFDEDGFRSNIRHWVDDLAISGLFIAGKQGEFFSMTLEERKRNIEVAVD
ECGGQAGTIFSASDQNFETVVELALHAQNCGADYVVVHAPVLHFVSDPDEILYEYYKAICERVDIGIAMWSHPDSGYLMS
PQLCARIAELPNIVAIKYSVPRPLYVELTQLAGDKIHVSTADEGAWLDNIEELGWRLYLCSSPPYQIQSKVDQRMNEYTR
LAFEGNFAEARQVRDSLDPVREAFKRTKPADKPQAHGKYWQELLGQVGGGVRPPMLNLTEAEKAATRAAFAASGLRV

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=170, Percent_Identity=28.8235294117647, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788823, Length=309, Percent_Identity=23.9482200647249, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87082415, Length=169, Percent_Identity=28.4023668639053, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 35608; Mature: 35608

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNRLDAKDHAREHFNGIWAACLNPWRPDGAFDEDGFRSNIRHWVDDLAISGLFIAGKQ
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCC
GEFFSMTLEERKRNIEVAVDECGGQAGTIFSASDQNFETVVELALHAQNCGADYVVVHAP
CCEEEEEHHHHHCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHH
VLHFVSDPDEILYEYYKAICERVDIGIAMWSHPDSGYLMSPQLCARIAELPNIVAIKYSV
HHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEECHHHHHHHHHCCCEEEEEECC
PRPLYVELTQLAGDKIHVSTADEGAWLDNIEELGWRLYLCSSPPYQIQSKVDQRMNEYTR
CCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH
LAFEGNFAEARQVRDSLDPVREAFKRTKPADKPQAHGKYWQELLGQVGGGVRPPMLNLTE
HEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHH
AEKAATRAAFAASGLRV
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKYNRLDAKDHAREHFNGIWAACLNPWRPDGAFDEDGFRSNIRHWVDDLAISGLFIAGKQ
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCC
GEFFSMTLEERKRNIEVAVDECGGQAGTIFSASDQNFETVVELALHAQNCGADYVVVHAP
CCEEEEEHHHHHCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHH
VLHFVSDPDEILYEYYKAICERVDIGIAMWSHPDSGYLMSPQLCARIAELPNIVAIKYSV
HHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEECHHHHHHHHHCCCEEEEEECC
PRPLYVELTQLAGDKIHVSTADEGAWLDNIEELGWRLYLCSSPPYQIQSKVDQRMNEYTR
CCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH
LAFEGNFAEARQVRDSLDPVREAFKRTKPADKPQAHGKYWQELLGQVGGGVRPPMLNLTE
HEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHH
AEKAATRAAFAASGLRV
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA