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The map label for this gene is yiaM [C]

Identifier: 89053940

GI number: 89053940

Start: 1418658

End: 1419206

Strand: Direct

Name: yiaM [C]

Synonym: Jann_1449

Alternate gene names: 89053940

Gene position: 1418658-1419206 (Clockwise)

Preceding gene: 89053939

Following gene: 89053941

Centisome position: 32.85

GC content: 64.3

Gene sequence:

>549_bases
ATGCTCCACCGCCTCTCCGCCGCTTGGGCGCGGGTCGAGATGGCCACCGCTGCCCTTCTGGCGGTCGCCGTGACCCTGCT
GATCCTGCTCAACGTCGTGACCCGCTCGATGAACAACGCGCTCTTCTGGGTCGATGAGACGGCGATCTACGCCATGGTCT
GGATGACGTTTCTGGGCGCCTCCGCCGCGATCCAATCCCGCCAGCAGGTGGCGATCACGATCCTGACCGATGCGCTGCCG
GGCGGGGCGCGCCGCGTGGCCGCAAAACTGGTCGACGCGCTGGTCTTCGTCTTCGCCTGCGCCATGCTCTACTTTTGCTG
GCGCTGGTATCTGCCGCTGACGATCATCGGCACCGGATTTGACACGATGGCGTTCCAGGGCGCGACCTTCAATTTCATCT
ATGCCGAACCCACCAGCACCATCGGCATCCAGAAGTGGATCATCTGGCTGGTCATGCCCCTGTTTTCCTGTGGCGTCTTC
CTGCACGCGCTGGCCCATCTGATCGACCTCACCCCGCCCGAGGCACGGCTGTCGGAGGTGCAGGCATGA

Upstream 100 bases:

>100_bases
CGCTCTGCTGCGGCAGAATTAGAATAACGCAGTATTTCAATGACTTGGCGGGATGCTCAAACTTGAGCATCCCGCTACAC
CCCGACAGGACCCGCGCATA

Downstream 100 bases:

>100_bases
CGCCCGTCATCTTCCTGACCAAGCTGCTGCTGGCGGTTCCGGTTGCCATCGTCCTGTCGTTGACCGCGATCTGGTACATC
TGGGAGAGTGACAACACGAT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic; ABC Transporte Permease Protein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MLHRLSAAWARVEMATAALLAVAVTLLILLNVVTRSMNNALFWVDETAIYAMVWMTFLGASAAIQSRQQVAITILTDALP
GGARRVAAKLVDALVFVFACAMLYFCWRWYLPLTIIGTGFDTMAFQGATFNFIYAEPTSTIGIQKWIIWLVMPLFSCGVF
LHALAHLIDLTPPEARLSEVQA

Sequences:

>Translated_182_residues
MLHRLSAAWARVEMATAALLAVAVTLLILLNVVTRSMNNALFWVDETAIYAMVWMTFLGASAAIQSRQQVAITILTDALP
GGARRVAAKLVDALVFVFACAMLYFCWRWYLPLTIIGTGFDTMAFQGATFNFIYAEPTSTIGIQKWIIWLVMPLFSCGVF
LHALAHLIDLTPPEARLSEVQA
>Mature_182_residues
MLHRLSAAWARVEMATAALLAVAVTLLILLNVVTRSMNNALFWVDETAIYAMVWMTFLGASAAIQSRQQVAITILTDALP
GGARRVAAKLVDALVFVFACAMLYFCWRWYLPLTIIGTGFDTMAFQGATFNFIYAEPTSTIGIQKWIIWLVMPLFSCGVF
LHALAHLIDLTPPEARLSEVQA

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20115; Mature: 20115

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHRLSAAWARVEMATAALLAVAVTLLILLNVVTRSMNNALFWVDETAIYAMVWMTFLGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHH
SAAIQSRQQVAITILTDALPGGARRVAAKLVDALVFVFACAMLYFCWRWYLPLTIIGTGF
HHHHHCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
DTMAFQGATFNFIYAEPTSTIGIQKWIIWLVMPLFSCGVFLHALAHLIDLTPPEARLSEV
HHHEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
QA
CC
>Mature Secondary Structure
MLHRLSAAWARVEMATAALLAVAVTLLILLNVVTRSMNNALFWVDETAIYAMVWMTFLGA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHH
SAAIQSRQQVAITILTDALPGGARRVAAKLVDALVFVFACAMLYFCWRWYLPLTIIGTGF
HHHHHCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
DTMAFQGATFNFIYAEPTSTIGIQKWIIWLVMPLFSCGVFLHALAHLIDLTPPEARLSEV
HHHEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
QA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA