| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89053869
Identifier: 89053869
GI number: 89053869
Start: 1347670
End: 1347927
Strand: Reverse
Name: 89053869
Synonym: Jann_1378
Alternate gene names: NA
Gene position: 1347927-1347670 (Counterclockwise)
Preceding gene: 89053870
Following gene: 89053868
Centisome position: 31.22
GC content: 58.91
Gene sequence:
>258_bases TTGAACGATGTCAGTGAACCGCACATCGCTGCGTTCTCCAACGCCTTCACCAGCGCTTTGAAATCAGCGAAGTTGTCGAA CGCCGCGAAGCCCGCGGTCCTCTGCAAGGCGTGTTCATTCATCTTCCACCCGCACACGCAATTGCAGGGTTTGTTGCCCC CGGACGCGCAGCGCGCACCCCATCCGACGCATCCATGCGTCGCGCAAAATCCCGCTCCGATATCTCAACACTGGATGCCA TCTCCACACTACGCCTGA
Upstream 100 bases:
>100_bases GGCACCACAGATCTCCATGGACAGCCCCGAAAGGCTAAGCGCATAGGATAACCCAAAGCGCGTCGCATGCCTCCCCTGAC CGGGGCCCGGCCTGATCGCG
Downstream 100 bases:
>100_bases AACCCAATCGCCTGCATCGCTCAATCTGAGTTCTGTTGGCCCTCTAGACCGCCATACTGATCTGTCAGCGAGTTGAGGAT TTCAGCGGGTATCTCTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MNDVSEPHIAAFSNAFTSALKSAKLSNAAKPAVLCKACSFIFHPHTQLQGLLPPDAQRAPHPTHPCVAQNPAPISQHWMP SPHYA
Sequences:
>Translated_85_residues MNDVSEPHIAAFSNAFTSALKSAKLSNAAKPAVLCKACSFIFHPHTQLQGLLPPDAQRAPHPTHPCVAQNPAPISQHWMP SPHYA >Mature_85_residues MNDVSEPHIAAFSNAFTSALKSAKLSNAAKPAVLCKACSFIFHPHTQLQGLLPPDAQRAPHPTHPCVAQNPAPISQHWMP SPHYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9146; Mature: 9146
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVSEPHIAAFSNAFTSALKSAKLSNAAKPAVLCKACSFIFHPHTQLQGLLPPDAQRAP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCC HPTHPCVAQNPAPISQHWMPSPHYA CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNDVSEPHIAAFSNAFTSALKSAKLSNAAKPAVLCKACSFIFHPHTQLQGLLPPDAQRAP CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCCCCCCCCCCC HPTHPCVAQNPAPISQHWMPSPHYA CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA