Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053759

Identifier: 89053759

GI number: 89053759

Start: 1229013

End: 1229300

Strand: Direct

Name: 89053759

Synonym: Jann_1268

Alternate gene names: NA

Gene position: 1229013-1229300 (Clockwise)

Preceding gene: 89053758

Following gene: 89053760

Centisome position: 28.46

GC content: 59.72

Gene sequence:

>288_bases
ATGCCCAAAGGCTACATCATCGGCCATATCACGGTGAACGACCCCGAGGCCTACAAGGAGTATATCGAGCGTGACACGCC
GATCCTTCTGAGCCACGGCGCGCGTCCGATTGTCCGTGGCGGCAAGGCCGAAGTGCTGGAGGGGGAGACGTTTGAACGCC
ACGTCATCTTTGAATTTGACAGTTATGAGGCCGCACTGGCCGCCTACAATGACCCCGACTATCAAGAGGTTGCCGAGATC
CGCCGCCGCACCGCCGATAGCGTGATCCTGGTTGTGGAGGGCGTCTGA

Upstream 100 bases:

>100_bases
TAAGGTCTGAAGGGACGGCGGGTTAAATCCCGCCCGACGCAACATTTCGGACGGGCCGTTTCGGTGGCCCGTCCACACCC
CAAGAACAAGGCGGCGCGAC

Downstream 100 bases:

>100_bases
GATGTCCGACGCCACCGGCCCCGACCAGTTCACCGCACCCACACCCGACAACGCCCTGCGCAATGCCGAGCGCACCGATA
CCGGCCCGGTCCTTGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MPKGYIIGHITVNDPEAYKEYIERDTPILLSHGARPIVRGGKAEVLEGETFERHVIFEFDSYEAALAAYNDPDYQEVAEI
RRRTADSVILVVEGV

Sequences:

>Translated_95_residues
MPKGYIIGHITVNDPEAYKEYIERDTPILLSHGARPIVRGGKAEVLEGETFERHVIFEFDSYEAALAAYNDPDYQEVAEI
RRRTADSVILVVEGV
>Mature_94_residues
PKGYIIGHITVNDPEAYKEYIERDTPILLSHGARPIVRGGKAEVLEGETFERHVIFEFDSYEAALAAYNDPDYQEVAEIR
RRTADSVILVVEGV

Specific function: Unknown

COG id: COG5470

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10722; Mature: 10591

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKGYIIGHITVNDPEAYKEYIERDTPILLSHGARPIVRGGKAEVLEGETFERHVIFEFD
CCCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCCCEECCCCCEEECCCCCCEEEEEEEC
SYEAALAAYNDPDYQEVAEIRRRTADSVILVVEGV
CCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure 
PKGYIIGHITVNDPEAYKEYIERDTPILLSHGARPIVRGGKAEVLEGETFERHVIFEFD
CCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCCCEECCCCCEEECCCCCCEEEEEEEC
SYEAALAAYNDPDYQEVAEIRRRTADSVILVVEGV
CCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA