Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053758

Identifier: 89053758

GI number: 89053758

Start: 1227800

End: 1228915

Strand: Direct

Name: 89053758

Synonym: Jann_1267

Alternate gene names: NA

Gene position: 1227800-1228915 (Clockwise)

Preceding gene: 89053757

Following gene: 89053759

Centisome position: 28.43

GC content: 63.53

Gene sequence:

>1116_bases
ATGAATCTCAAGAGCCTTATGCTCCTGACAACCGGCGCCAGCATGGCCGCCACCGGCGCGATGGCCGACGGCCACATGGC
CAGTTCCATGACCCTCGTGTCCTGGGGCGGCGCCTATCAGGCCAGCCAGACCAACGCCTATTCCGATCCCTACGCCGCCA
TGCATGACGGTCTGGAGATCATCTGGGACGAAAGCTCGGCCGAGGCCGTGGCCCGTCTGCGCGCCATGAACGAGGCGGGC
AACATCACCTGGGACCTCGTGGACGTTGTGGCCGCTGACGCCATCCGCCTCTGCGACGAAGGTCTGGCGATGGAAATCGA
CCATGACGAGATGCTGGCCCCGGCCCCCGATGGTACGCCAGCGTCCGAGGATTTCGGCGATCTGATCGTGTCCGACTGCT
TCATCCCGCAGATCGTGTATTCCACCACGGTGGGGTATCGCACGGACGTGGCAGAGTGGAACGGCAACACGCCGTCCGAC
ATCTGCGCGATTTTCGATACCGAAGCGTTCCCCGGTCAGCGGTCGCTGGAGCGTCGTCCGATCGGCAACCTGGAATGGGC
GCTGATCTGTGACGGCGTCGCGATGGAAGATGTCTACGACGTGCTTGAGACGGAAGAGGGTGTGGAGCAAGCCTTCGCAA
TGCTCGACACGATCCAGGACCAGACCGTTTGGTGGTCCGCCGGTGCAGACACGCCCCAGCTTCTGGCTGACGGCGAAGTT
GTCATGGGCTCCACCTATAACGGTCGTTTGTTCTCTCTGATCGAGGAGCAGGACCAGCCCGTCGCCATGCTGTGGGACGC
GCAGGTGTTCGACCTTGACGGTTGGATCATCCCCGAGGGGCTGCCCGAGGATCGCCTGGCCCGTACGCTGGACTTCGTGC
GCTTCGCCACGGACACACAGCGTCTGGCCGATCAGTCGCGCTGGATCTCCTACGGTCCCGCACGCGCCTCTTCCGCGCCT
CTGGTTGGCACGCATGCCGATCTGGGCATCGAGATGGCACCGCATATGCCAACCGACCCGGCCAATGCCGAGCGGACGTT
CCTGTTCAACTACGAGTGGTGGGCCGACTACCGCGACGACATGGACGCCCGTTTCCAGGCGTGGTTGGCGCAATAA

Upstream 100 bases:

>100_bases
TGATGGTCAAACGCCCGCCCAAAAACCTCGGGGGATCACCCCGTATGAATACCAGCCTTTTGGGGCATTCGTCCCAGAGG
TCCAACCAAGGAGAGACCAC

Downstream 100 bases:

>100_bases
GGTCTGAAGGGACGGCGGGTTAAATCCCGCCCGACGCAACATTTCGGACGGGCCGTTTCGGTGGCCCGTCCACACCCCAA
GAACAAGGCGGCGCGACATG

Product: polyamine ABC transporter periplasmic polyamine-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MNLKSLMLLTTGASMAATGAMADGHMASSMTLVSWGGAYQASQTNAYSDPYAAMHDGLEIIWDESSAEAVARLRAMNEAG
NITWDLVDVVAADAIRLCDEGLAMEIDHDEMLAPAPDGTPASEDFGDLIVSDCFIPQIVYSTTVGYRTDVAEWNGNTPSD
ICAIFDTEAFPGQRSLERRPIGNLEWALICDGVAMEDVYDVLETEEGVEQAFAMLDTIQDQTVWWSAGADTPQLLADGEV
VMGSTYNGRLFSLIEEQDQPVAMLWDAQVFDLDGWIIPEGLPEDRLARTLDFVRFATDTQRLADQSRWISYGPARASSAP
LVGTHADLGIEMAPHMPTDPANAERTFLFNYEWWADYRDDMDARFQAWLAQ

Sequences:

>Translated_371_residues
MNLKSLMLLTTGASMAATGAMADGHMASSMTLVSWGGAYQASQTNAYSDPYAAMHDGLEIIWDESSAEAVARLRAMNEAG
NITWDLVDVVAADAIRLCDEGLAMEIDHDEMLAPAPDGTPASEDFGDLIVSDCFIPQIVYSTTVGYRTDVAEWNGNTPSD
ICAIFDTEAFPGQRSLERRPIGNLEWALICDGVAMEDVYDVLETEEGVEQAFAMLDTIQDQTVWWSAGADTPQLLADGEV
VMGSTYNGRLFSLIEEQDQPVAMLWDAQVFDLDGWIIPEGLPEDRLARTLDFVRFATDTQRLADQSRWISYGPARASSAP
LVGTHADLGIEMAPHMPTDPANAERTFLFNYEWWADYRDDMDARFQAWLAQ
>Mature_371_residues
MNLKSLMLLTTGASMAATGAMADGHMASSMTLVSWGGAYQASQTNAYSDPYAAMHDGLEIIWDESSAEAVARLRAMNEAG
NITWDLVDVVAADAIRLCDEGLAMEIDHDEMLAPAPDGTPASEDFGDLIVSDCFIPQIVYSTTVGYRTDVAEWNGNTPSD
ICAIFDTEAFPGQRSLERRPIGNLEWALICDGVAMEDVYDVLETEEGVEQAFAMLDTIQDQTVWWSAGADTPQLLADGEV
VMGSTYNGRLFSLIEEQDQPVAMLWDAQVFDLDGWIIPEGLPEDRLARTLDFVRFATDTQRLADQSRWISYGPARASSAP
LVGTHADLGIEMAPHMPTDPANAERTFLFNYEWWADYRDDMDARFQAWLAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40855; Mature: 40855

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKSLMLLTTGASMAATGAMADGHMASSMTLVSWGGAYQASQTNAYSDPYAAMHDGLEI
CCCCEEEEEECCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCEEE
IWDESSAEAVARLRAMNEAGNITWDLVDVVAADAIRLCDEGLAMEIDHDEMLAPAPDGTP
EECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
ASEDFGDLIVSDCFIPQIVYSTTVGYRTDVAEWNGNTPSDICAIFDTEAFPGQRSLERRP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHEEEEEECCCCCCCCCCCCCC
IGNLEWALICDGVAMEDVYDVLETEEGVEQAFAMLDTIQDQTVWWSAGADTPQLLADGEV
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHEECCCE
VMGSTYNGRLFSLIEEQDQPVAMLWDAQVFDLDGWIIPEGLPEDRLARTLDFVRFATDTQ
EEECCCCCHHEEEHHCCCCCEEEEECCEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHH
RLADQSRWISYGPARASSAPLVGTHADLGIEMAPHMPTDPANAERTFLFNYEWWADYRDD
HHHHHHCCEECCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCEEEEEEEHHHCCCCCC
MDARFQAWLAQ
HHHHHHHHHCC
>Mature Secondary Structure
MNLKSLMLLTTGASMAATGAMADGHMASSMTLVSWGGAYQASQTNAYSDPYAAMHDGLEI
CCCCEEEEEECCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCEEE
IWDESSAEAVARLRAMNEAGNITWDLVDVVAADAIRLCDEGLAMEIDHDEMLAPAPDGTP
EECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
ASEDFGDLIVSDCFIPQIVYSTTVGYRTDVAEWNGNTPSDICAIFDTEAFPGQRSLERRP
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHEEEEEECCCCCCCCCCCCCC
IGNLEWALICDGVAMEDVYDVLETEEGVEQAFAMLDTIQDQTVWWSAGADTPQLLADGEV
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHEECCCE
VMGSTYNGRLFSLIEEQDQPVAMLWDAQVFDLDGWIIPEGLPEDRLARTLDFVRFATDTQ
EEECCCCCHHEEEHHCCCCCEEEEECCEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHH
RLADQSRWISYGPARASSAPLVGTHADLGIEMAPHMPTDPANAERTFLFNYEWWADYRDD
HHHHHHCCEECCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCEEEEEEEHHHCCCCCC
MDARFQAWLAQ
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA