| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053697
Identifier: 89053697
GI number: 89053697
Start: 1166578
End: 1167576
Strand: Reverse
Name: 89053697
Synonym: Jann_1206
Alternate gene names: NA
Gene position: 1167576-1166578 (Counterclockwise)
Preceding gene: 89053704
Following gene: 89053695
Centisome position: 27.04
GC content: 64.96
Gene sequence:
>999_bases GTGTCAGCCCACCCGCCTCTTTTCCGGTTTCAAACCTACCCCGCGCGTGCTCTGCGGGTGGTCTCGGGCGCAAATATCGG GGACGGGATCGGGCTGGAGACTGACGCGCTGCCGGGCGACATTTACCGCCTCGCATCGGGCCATGGGGCAGAGCGGCTGG CCATCTCCGACGCCGGAGAGGGCGGACGCCCCTGCGTGGCCGACGGATCAGACATCGGCACGCCGGGAGAGGCGCTGACG ATTTCCGCCTGCCACATGTTGATGGGTCCGTCGGGTAACGTGGCGGAGGTCCTGATCCTGACCCACACCACCGAGGGCGG AGATCAGTTGTATGTCCTGCCCCTCTCGACCCTGAAGATCGACGCGGAATATGAATTGATCGGCTCCGAGATTGCCAGTG CGCCCGAACGTTTTGCCGATATCGCCAGTGTCAGCTTTCTGGCGGGGACGCATCTGACGCTTGCCAACGGCAAACAGATC CCGGTGGAGCATGTGCAGATCGGTGATCTTCTGCTGACCCGCGAAAATGGGCCGCAGCCGGTGCGCTGGATCGGCTTTCA GACCCGCCGCGCCGTGGGCAACGCCGCACCCGTGCGGATCAAGGCGGGCACGCTCAACACCTCTCGCGACCTGCGCCTGT CGCCGCAGCATCGCCTGTTCATCTGGCAGCGCCGCGACGAATTGGGCACCGGACGGGCCGAGGTGATGGTGAAGGCCGAG CTATTGGTAAACGGCGACACCGTCCTGCGCGAAGAGGGTGGCCATGTGGACAGCTTTCAGATCGTCTTCAACAGCCACGA AATCATCTACGCCGAGGGGATCGCCGTCGAAAGCCTTCTGGTGACGGGGCAGACCCGCGCACGTCTGCCCAAAGATCTGG CGCTGACCGTCTCCGACACTGCCGCGGCCAGTGCCGCCGCACTGGAATTGGGCGATGACGCGGGCGCAGATATGGTGGAG CGTTTGTCGCGCGCCTCCAAGGGCGTGGGTCGGGGCTAG
Upstream 100 bases:
>100_bases TTGAAATCTGCCTACCAGCCCCCCTGCTCCGCCACCAGCCTTGACCGCCCTGCCCCGCGCCTGTCTAACCGGGAAATCCC CTGCAAAGGACCGCGAAAAC
Downstream 100 bases:
>100_bases GCGGCTGCGTCAGCCGGTGCCGAAGAACTCTTCCCGTACGATTTTACCGTCCGCGACGGTGTAAATCGCCACCTCCGTCA TATCCATCCGCTCGCCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSAHPPLFRFQTYPARALRVVSGANIGDGIGLETDALPGDIYRLASGHGAERLAISDAGEGGRPCVADGSDIGTPGEALT ISACHMLMGPSGNVAEVLILTHTTEGGDQLYVLPLSTLKIDAEYELIGSEIASAPERFADIASVSFLAGTHLTLANGKQI PVEHVQIGDLLLTRENGPQPVRWIGFQTRRAVGNAAPVRIKAGTLNTSRDLRLSPQHRLFIWQRRDELGTGRAEVMVKAE LLVNGDTVLREEGGHVDSFQIVFNSHEIIYAEGIAVESLLVTGQTRARLPKDLALTVSDTAAASAAALELGDDAGADMVE RLSRASKGVGRG
Sequences:
>Translated_332_residues MSAHPPLFRFQTYPARALRVVSGANIGDGIGLETDALPGDIYRLASGHGAERLAISDAGEGGRPCVADGSDIGTPGEALT ISACHMLMGPSGNVAEVLILTHTTEGGDQLYVLPLSTLKIDAEYELIGSEIASAPERFADIASVSFLAGTHLTLANGKQI PVEHVQIGDLLLTRENGPQPVRWIGFQTRRAVGNAAPVRIKAGTLNTSRDLRLSPQHRLFIWQRRDELGTGRAEVMVKAE LLVNGDTVLREEGGHVDSFQIVFNSHEIIYAEGIAVESLLVTGQTRARLPKDLALTVSDTAAASAAALELGDDAGADMVE RLSRASKGVGRG >Mature_331_residues SAHPPLFRFQTYPARALRVVSGANIGDGIGLETDALPGDIYRLASGHGAERLAISDAGEGGRPCVADGSDIGTPGEALTI SACHMLMGPSGNVAEVLILTHTTEGGDQLYVLPLSTLKIDAEYELIGSEIASAPERFADIASVSFLAGTHLTLANGKQIP VEHVQIGDLLLTRENGPQPVRWIGFQTRRAVGNAAPVRIKAGTLNTSRDLRLSPQHRLFIWQRRDELGTGRAEVMVKAEL LVNGDTVLREEGGHVDSFQIVFNSHEIIYAEGIAVESLLVTGQTRARLPKDLALTVSDTAAASAAALELGDDAGADMVER LSRASKGVGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35140; Mature: 35009
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHPPLFRFQTYPARALRVVSGANIGDGIGLETDALPGDIYRLASGHGAERLAISDAGE CCCCCCCEEEECCCHHHEEEECCCCCCCCCCCCCCCCCCHHHEECCCCCCEEEEEECCCC GGRPCVADGSDIGTPGEALTISACHMLMGPSGNVAEVLILTHTTEGGDQLYVLPLSTLKI CCCCEEECCCCCCCCCCEEEEEEEHEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEEEE DAEYELIGSEIASAPERFADIASVSFLAGTHLTLANGKQIPVEHVQIGDLLLTRENGPQP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHEEEECEEEEECCCCCCC VRWIGFQTRRAVGNAAPVRIKAGTLNTSRDLRLSPQHRLFIWQRRDELGTGRAEVMVKAE EEEECCCHHHHCCCCCCEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCCCEEEEEEEE LLVNGDTVLREEGGHVDSFQIVFNSHEIIYAEGIAVESLLVTGQTRARLPKDLALTVSDT EEECCCEEEECCCCCEEEEEEEEECCEEEEECCCEEEEEEEECCHHHCCCCCEEEEEECC AAASAAALELGDDAGADMVERLSRASKGVGRG CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SAHPPLFRFQTYPARALRVVSGANIGDGIGLETDALPGDIYRLASGHGAERLAISDAGE CCCCCCEEEECCCHHHEEEECCCCCCCCCCCCCCCCCCHHHEECCCCCCEEEEEECCCC GGRPCVADGSDIGTPGEALTISACHMLMGPSGNVAEVLILTHTTEGGDQLYVLPLSTLKI CCCCEEECCCCCCCCCCEEEEEEEHEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEEEE DAEYELIGSEIASAPERFADIASVSFLAGTHLTLANGKQIPVEHVQIGDLLLTRENGPQP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHEEEECEEEEECCCCCCC VRWIGFQTRRAVGNAAPVRIKAGTLNTSRDLRLSPQHRLFIWQRRDELGTGRAEVMVKAE EEEECCCHHHHCCCCCCEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCCCEEEEEEEE LLVNGDTVLREEGGHVDSFQIVFNSHEIIYAEGIAVESLLVTGQTRARLPKDLALTVSDT EEECCCEEEECCCCCEEEEEEEEECCEEEEECCCEEEEEEEECCHHHCCCCCEEEEEECC AAASAAALELGDDAGADMVERLSRASKGVGRG CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA