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The map label for this gene is alkB1 [H]

Identifier: 89053704

GI number: 89053704

Start: 1172602

End: 1173849

Strand: Reverse

Name: alkB1 [H]

Synonym: Jann_1213

Alternate gene names: 89053704

Gene position: 1173849-1172602 (Counterclockwise)

Preceding gene: 89053708

Following gene: 89053697

Centisome position: 27.19

GC content: 65.79

Gene sequence:

>1248_bases
ATGCCCGTCATGGCCCGTTACGCCGCTATCACGTTGCCGCCGATGGTCCTGCTGCTTTTGGCAGGCACAGTCTGGGGCGG
GTTCGCCTGGATGGCCCTGATCTGGCTGACGCTGGTGGCCGCCCTGGCAGATCGCCTGCTGGAGCCGCCTGCCCCCACCC
CGGCGGAGGAGGACACGGCGCCGTGGTCAGATGCATTGTCTGTGGGCCTCGCCATCGGGCACCTGCTGCTCCTTGTGACC
ACGGCCTCGGCACTCACGTCGGGCACGCTGACATTTGGCCAATCCGTCGCGCTGTTCTTTGCGACCGCATCCTTTTTCGG
ACAGGTTAGCCACCCCAACGCCCATGAGTTGATCCACCGCGCGCCCCTTGCGCTGCGGGCCCTTGGTGCCGCGGTCTATA
CATCCGTGGGCTTCGGGCATCACGTCTCGGCCCACCGCCTGATCCACCACCGCCACGTGGGCACGGAGGCCGATCCCAAC
ACGCCGTTGCCGGGCGAGAGCTTCTGGAGCTACCTCCCCCGCGCTTGGCGCGGATCGTTCGAGGCTGGCGCGGAATGTGA
GGTTGACCGGCTGGAACACAAGGGGCGTGGCGCAAATCACATCACCAATCCCTATTGGATCTGGCTGGGGGGCGCGCTGC
TGTCAGTGATCGTTATGGTGTGGATCGCAGGCCTTGGCGGCGCGTTGGTTCTGGCGGGGTTGGGCGCGCTGACGGGGGCA
CAGATCCTGATGTCGGATTACGTGCAACATTATGGCCTGCAACGACTTCTGCTTCCCAACGGGCGGTATGAGCCGGTCGC
CGCCCACCATAGTTGGAACGCGCCAATGGGATTCTCATCCTACCTGATGATGAACGCACCCGCCCATTCGGAGCATCACC
TGCACCCGGACCGTCCCTATGACCGGCTTGACCCAAACGCCGAGGTCCCCACGCTGCCGCTCTCGATGCCGATCATGGCG
ATGATCGCGCTGATCCCCAGCGTCTGGTCTCGCATGATGGACCGCCGCGCCCTGCGCGTGATGGAGGCGGCGGAGGCCGC
ACATCTTCGGCCCCCTCAACCACAGCCCGCACCGGTCCGCGACCAGCCCACACAGGTCGATGCGCCAGCCAAGGCTGCTG
TTCCCCTGCCGCCTGCCGACGCGACGCAATCGGTCGCATCATCCGAGGCAGACCCCGCTCCGGTTAACGATCCGACGGAC
CCGGAAGACGCGGATCTGCTCAACAGGATACGCGCTGCCACCCAGTAG

Upstream 100 bases:

>100_bases
ACGGCGCGCTTGGAAAGGCCGCAGCGTTGCGCCATTGTTTCGCCAGATTGCCCGGTTAGACGCACCATTATCCCAATTCG
ACCAGAGGACCCGTCCTTTC

Downstream 100 bases:

>100_bases
AATGGGGTGCCTGTCGGTTGCCACCTCGTCGTCCTGGCAAATACAACTCCCCGCGATGGGCTGCGATCTTTTCTCCGCGG
GAAAGTCGCATCAAGGCGGG

Product: alkane 1-monooxygenase

Products: NA

Alternate protein names: Alkane hydroxylase; AHs; Terminal alkane hydroxylase [H]

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MPVMARYAAITLPPMVLLLLAGTVWGGFAWMALIWLTLVAALADRLLEPPAPTPAEEDTAPWSDALSVGLAIGHLLLLVT
TASALTSGTLTFGQSVALFFATASFFGQVSHPNAHELIHRAPLALRALGAAVYTSVGFGHHVSAHRLIHHRHVGTEADPN
TPLPGESFWSYLPRAWRGSFEAGAECEVDRLEHKGRGANHITNPYWIWLGGALLSVIVMVWIAGLGGALVLAGLGALTGA
QILMSDYVQHYGLQRLLLPNGRYEPVAAHHSWNAPMGFSSYLMMNAPAHSEHHLHPDRPYDRLDPNAEVPTLPLSMPIMA
MIALIPSVWSRMMDRRALRVMEAAEAAHLRPPQPQPAPVRDQPTQVDAPAKAAVPLPPADATQSVASSEADPAPVNDPTD
PEDADLLNRIRAATQ

Sequences:

>Translated_415_residues
MPVMARYAAITLPPMVLLLLAGTVWGGFAWMALIWLTLVAALADRLLEPPAPTPAEEDTAPWSDALSVGLAIGHLLLLVT
TASALTSGTLTFGQSVALFFATASFFGQVSHPNAHELIHRAPLALRALGAAVYTSVGFGHHVSAHRLIHHRHVGTEADPN
TPLPGESFWSYLPRAWRGSFEAGAECEVDRLEHKGRGANHITNPYWIWLGGALLSVIVMVWIAGLGGALVLAGLGALTGA
QILMSDYVQHYGLQRLLLPNGRYEPVAAHHSWNAPMGFSSYLMMNAPAHSEHHLHPDRPYDRLDPNAEVPTLPLSMPIMA
MIALIPSVWSRMMDRRALRVMEAAEAAHLRPPQPQPAPVRDQPTQVDAPAKAAVPLPPADATQSVASSEADPAPVNDPTD
PEDADLLNRIRAATQ
>Mature_414_residues
PVMARYAAITLPPMVLLLLAGTVWGGFAWMALIWLTLVAALADRLLEPPAPTPAEEDTAPWSDALSVGLAIGHLLLLVTT
ASALTSGTLTFGQSVALFFATASFFGQVSHPNAHELIHRAPLALRALGAAVYTSVGFGHHVSAHRLIHHRHVGTEADPNT
PLPGESFWSYLPRAWRGSFEAGAECEVDRLEHKGRGANHITNPYWIWLGGALLSVIVMVWIAGLGGALVLAGLGALTGAQ
ILMSDYVQHYGLQRLLLPNGRYEPVAAHHSWNAPMGFSSYLMMNAPAHSEHHLHPDRPYDRLDPNAEVPTLPLSMPIMAM
IALIPSVWSRMMDRRALRVMEAAEAAHLRPPQPQPAPVRDQPTQVDAPAKAAVPLPPADATQSVASSEADPAPVNDPTDP
EDADLLNRIRAATQ

Specific function: Catalyzes the hydroxylation of n-alkanes and fatty acids in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases C5-C12 hydrocarbones [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family. AlkB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.15.3 [H]

Molecular weight: Translated: 44649; Mature: 44518

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVMARYAAITLPPMVLLLLAGTVWGGFAWMALIWLTLVAALADRLLEPPAPTPAEEDTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PWSDALSVGLAIGHLLLLVTTASALTSGTLTFGQSVALFFATASFFGQVSHPNAHELIHR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
APLALRALGAAVYTSVGFGHHVSAHRLIHHRHVGTEADPNTPLPGESFWSYLPRAWRGSF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHCCCC
EAGAECEVDRLEHKGRGANHITNPYWIWLGGALLSVIVMVWIAGLGGALVLAGLGALTGA
CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QILMSDYVQHYGLQRLLLPNGRYEPVAAHHSWNAPMGFSSYLMMNAPAHSEHHLHPDRPY
HHHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCC
DRLDPNAEVPTLPLSMPIMAMIALIPSVWSRMMDRRALRVMEAAEAAHLRPPQPQPAPVR
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DQPTQVDAPAKAAVPLPPADATQSVASSEADPAPVNDPTDPEDADLLNRIRAATQ
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PVMARYAAITLPPMVLLLLAGTVWGGFAWMALIWLTLVAALADRLLEPPAPTPAEEDTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PWSDALSVGLAIGHLLLLVTTASALTSGTLTFGQSVALFFATASFFGQVSHPNAHELIHR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
APLALRALGAAVYTSVGFGHHVSAHRLIHHRHVGTEADPNTPLPGESFWSYLPRAWRGSF
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHCCCC
EAGAECEVDRLEHKGRGANHITNPYWIWLGGALLSVIVMVWIAGLGGALVLAGLGALTGA
CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QILMSDYVQHYGLQRLLLPNGRYEPVAAHHSWNAPMGFSSYLMMNAPAHSEHHLHPDRPY
HHHHHHHHHHHCCCEEECCCCCCCCEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCC
DRLDPNAEVPTLPLSMPIMAMIALIPSVWSRMMDRRALRVMEAAEAAHLRPPQPQPAPVR
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DQPTQVDAPAKAAVPLPPADATQSVASSEADPAPVNDPTDPEDADLLNRIRAATQ
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA