Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053619

Identifier: 89053619

GI number: 89053619

Start: 1089406

End: 1090773

Strand: Reverse

Name: 89053619

Synonym: Jann_1128

Alternate gene names: NA

Gene position: 1090773-1089406 (Counterclockwise)

Preceding gene: 89053620

Following gene: 89053618

Centisome position: 25.26

GC content: 64.99

Gene sequence:

>1368_bases
ATGACACCACTCGCCCAAGCCGCTTTTGCGGCCACTCTCGCCCTGTCCGCCACCCTGCTCCACACCCAGGCCCAGGCCGC
GCCAGTCTCAACGGTGCCAGGCCCGAACGCACCGCAATACATTGATGTTCGGTTCAACTTCTTCAACCTCGCCAATGGGT
TCAACGCCGTGGAAGGCGTGGTGCGCGGTCTGTCGCTATCGGGCACAAGCGCGGCCTATTCCGTTGAAATCACGGCAAAT
TCCGCAGGCTTCGGGATCGGGGAATATGTTGGCAACCCGCTGGCCAATTCCTGGACCGTCTTGAACGGAGAGATCACCCA
GTTCGAGTTCTACTCCGCCGGTGCGTTCAACACGGCCCCCACCGTCACCACCGCCACCTTTGGCCTGAGCAACACGCCGG
GCTCCCCCATTGAAGGAGAGATCGGCCTCGGCGCGTCCTGGGCTGACGCAGAAACGGAAGATCTCGACGGCTCCGGCCTC
TATTTCACCGCCCTGCGCCGCTACGACAGGCTGCCCGTCCCCCGGACGCGGACGCAGCTGGCCGGGGCCATATCCCGGGC
AAACCTGTCCGAAACCGCCGCCGTTGCGCCCGTGCCATTGCCTGCGGGGATCTGGCTGTTGCTGGCGAGCCTTGCGGGCA
TGACCGGCCTGCGCCGCCTGTCCGCGCGGCCCAAACGGAGCACTCCCATGGCAACGATGGCCGGGTCGCTGGCGCTGTGT
CTCGGTGCTGCGTCCGCCGCCCAGGCAACACCCGTTGGGGTCTTCACTGGGACGCCACCGGCGAATTACTACGATTATTC
CTTTCGCTTCGTCGACGCCGTCACCAACGACATCTCAGCCGGTATCATCCGTGGCCTCAGCGCCAATGGCACAAGTGCTG
CCTACAGCGTAGAGGTGACGGCCAGCCAGGGCGTGTTCGGCATGGGCGAATATGTGGGCACGCCCATCCCGAACCTCTGG
ACCGTACAGAACGGCGTGATCCAATCGGTGGAGTTTTTCAGCTATGGCGCTGCCAACACCGCGCCCGCTGTCACGACGTC
CACCCTGATCTTCAGTTCAAATGCCAGCATGGCGGAGGCCTATAGCGGGGCCCATGCCAACCATCCCATCGCGGCTGGCT
TCCCCGAAAATGCTGAAACCGGCCTGACATTCGAGGTCTTGAGCAGTTACCACAGCCTGCCGTTGACTGCCTGGGGCGGG
GCGGCTCCCCGTGTGCCGGATGCAAACCCGTTTCCCACGCGCGGCACAGCCCGCAGCATGGCCGCTGTCTCGGAGGTATC
CGTTGCCCCCGTGCCCTTGCCCGCTGGCGTCTGGCTCCTCTTGGTGAGCCTCGGCGGTCTGGCGGGCCTGCGCCGTCTGC
GCGCCTGA

Upstream 100 bases:

>100_bases
CTCAGCCGTCGCGCGCGGTAGGGTCACACCACCCCTGACCTCGCGCTGTTTTCACTCAACGGCTTTCTTTGACCGGACCG
CTTTTGATCGGAGACGTTCC

Downstream 100 bases:

>100_bases
CATGACACCAACGCGGCAGGCGGGCGGCAAACCCCGCTTGCCGTACATGGCCCGCAGGCGTAAGCAAAACCGCATCCCAA
CGCCCGTGTGCCCCATGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MTPLAQAAFAATLALSATLLHTQAQAAPVSTVPGPNAPQYIDVRFNFFNLANGFNAVEGVVRGLSLSGTSAAYSVEITAN
SAGFGIGEYVGNPLANSWTVLNGEITQFEFYSAGAFNTAPTVTTATFGLSNTPGSPIEGEIGLGASWADAETEDLDGSGL
YFTALRRYDRLPVPRTRTQLAGAISRANLSETAAVAPVPLPAGIWLLLASLAGMTGLRRLSARPKRSTPMATMAGSLALC
LGAASAAQATPVGVFTGTPPANYYDYSFRFVDAVTNDISAGIIRGLSANGTSAAYSVEVTASQGVFGMGEYVGTPIPNLW
TVQNGVIQSVEFFSYGAANTAPAVTTSTLIFSSNASMAEAYSGAHANHPIAAGFPENAETGLTFEVLSSYHSLPLTAWGG
AAPRVPDANPFPTRGTARSMAAVSEVSVAPVPLPAGVWLLLVSLGGLAGLRRLRA

Sequences:

>Translated_455_residues
MTPLAQAAFAATLALSATLLHTQAQAAPVSTVPGPNAPQYIDVRFNFFNLANGFNAVEGVVRGLSLSGTSAAYSVEITAN
SAGFGIGEYVGNPLANSWTVLNGEITQFEFYSAGAFNTAPTVTTATFGLSNTPGSPIEGEIGLGASWADAETEDLDGSGL
YFTALRRYDRLPVPRTRTQLAGAISRANLSETAAVAPVPLPAGIWLLLASLAGMTGLRRLSARPKRSTPMATMAGSLALC
LGAASAAQATPVGVFTGTPPANYYDYSFRFVDAVTNDISAGIIRGLSANGTSAAYSVEVTASQGVFGMGEYVGTPIPNLW
TVQNGVIQSVEFFSYGAANTAPAVTTSTLIFSSNASMAEAYSGAHANHPIAAGFPENAETGLTFEVLSSYHSLPLTAWGG
AAPRVPDANPFPTRGTARSMAAVSEVSVAPVPLPAGVWLLLVSLGGLAGLRRLRA
>Mature_454_residues
TPLAQAAFAATLALSATLLHTQAQAAPVSTVPGPNAPQYIDVRFNFFNLANGFNAVEGVVRGLSLSGTSAAYSVEITANS
AGFGIGEYVGNPLANSWTVLNGEITQFEFYSAGAFNTAPTVTTATFGLSNTPGSPIEGEIGLGASWADAETEDLDGSGLY
FTALRRYDRLPVPRTRTQLAGAISRANLSETAAVAPVPLPAGIWLLLASLAGMTGLRRLSARPKRSTPMATMAGSLALCL
GAASAAQATPVGVFTGTPPANYYDYSFRFVDAVTNDISAGIIRGLSANGTSAAYSVEVTASQGVFGMGEYVGTPIPNLWT
VQNGVIQSVEFFSYGAANTAPAVTTSTLIFSSNASMAEAYSGAHANHPIAAGFPENAETGLTFEVLSSYHSLPLTAWGGA
APRVPDANPFPTRGTARSMAAVSEVSVAPVPLPAGVWLLLVSLGGLAGLRRLRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46781; Mature: 46650

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLAQAAFAATLALSATLLHTQAQAAPVSTVPGPNAPQYIDVRFNFFNLANGFNAVEGV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHH
VRGLSLSGTSAAYSVEITANSAGFGIGEYVGNPLANSWTVLNGEITQFEFYSAGAFNTAP
HHCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCCEEEECCCEEEEEEEECCCCCCCC
TVTTATFGLSNTPGSPIEGEIGLGASWADAETEDLDGSGLYFTALRRYDRLPVPRTRTQL
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH
AGAISRANLSETAAVAPVPLPAGIWLLLASLAGMTGLRRLSARPKRSTPMATMAGSLALC
HHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LGAASAAQATPVGVFTGTPPANYYDYSFRFVDAVTNDISAGIIRGLSANGTSAAYSVEVT
HHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEE
ASQGVFGMGEYVGTPIPNLWTVQNGVIQSVEFFSYGAANTAPAVTTSTLIFSSNASMAEA
CCCCCCCCHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHH
YSGAHANHPIAAGFPENAETGLTFEVLSSYHSLPLTAWGGAAPRVPDANPFPTRGTARSM
HCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHH
AAVSEVSVAPVPLPAGVWLLLVSLGGLAGLRRLRA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPLAQAAFAATLALSATLLHTQAQAAPVSTVPGPNAPQYIDVRFNFFNLANGFNAVEGV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHH
VRGLSLSGTSAAYSVEITANSAGFGIGEYVGNPLANSWTVLNGEITQFEFYSAGAFNTAP
HHCCCCCCCCEEEEEEEEECCCCCCHHHHHCCCCCCCEEEECCCEEEEEEEECCCCCCCC
TVTTATFGLSNTPGSPIEGEIGLGASWADAETEDLDGSGLYFTALRRYDRLPVPRTRTQL
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH
AGAISRANLSETAAVAPVPLPAGIWLLLASLAGMTGLRRLSARPKRSTPMATMAGSLALC
HHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LGAASAAQATPVGVFTGTPPANYYDYSFRFVDAVTNDISAGIIRGLSANGTSAAYSVEVT
HHCCCCCCCCCEEEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEE
ASQGVFGMGEYVGTPIPNLWTVQNGVIQSVEFFSYGAANTAPAVTTSTLIFSSNASMAEA
CCCCCCCCHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHH
YSGAHANHPIAAGFPENAETGLTFEVLSSYHSLPLTAWGGAAPRVPDANPFPTRGTARSM
HCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHH
AAVSEVSVAPVPLPAGVWLLLVSLGGLAGLRRLRA
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA