| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is prs [H]
Identifier: 89053544
GI number: 89053544
Start: 1006980
End: 1008008
Strand: Reverse
Name: prs [H]
Synonym: Jann_1053
Alternate gene names: 89053544
Gene position: 1008008-1006980 (Counterclockwise)
Preceding gene: 89053552
Following gene: 89053533
Centisome position: 23.34
GC content: 61.13
Gene sequence:
>1029_bases ATGGCTGCACAAGATCCGAAACTGATTTCCGGCAATGCGAACAAGAACTTGGCCGACGCCATCGCGCGGCGCATGTCGAT GCATCGCGGCATGCAGGTGGGTCTTGTCGACGCGCGTGTCGAGCGGTTCAATGACGGTGAAATTTTCGTTGAGGTTTATG AAAATGTCCGGGGGGAGGACATGTTCATCATCCAGCCCACGTCCAAGCCCGCAAACGACAACCTGATGGAGCTGTTGATC ATGGCCGACGCGCTGCGCCGCTCCTCGGCCGCACGGATCACGGCGGTGATCCCCTATTTCGGCTATGCCCGGCAGGACAG GCGCACCAAGGCGCGCACGCCGATCACCGCCAAGCTGGTCGCCAATATGATTGCCTCCGGCGGGATCGAGCGGGTGCTGA CGATGGACCTGCACGCGGCTCAGATCCAGGGCTTCTTTGATATGCCCGTCGACAACCTCTATGCCTCGCCGATCTTTGCG CTGGATATCCTGCACCAGTTCGGCGGCGATATGAGCGATGTGATGGTCGTCTCTCCCGATGTTGGCGGCGTGGCGCGCGC GCGGGAACTGGCGACGCGGATCGGCGCGCCTTTGTCTATCGTAGACAAGCGACGGGAGAAGGTTGGCGAGGTTTCGGACA TGACGGTGATCGGGGATGTGACCGGCAAGAAATGCGTCATCATCGACGACATCGTGGATACCGCAGGCACCCTGTGCAAG GCCGCCGAGGTCCTGACGGAAGCGGGCGCGACGGAAGTCCATTCCTATATCACCCACGGCGTCATGTCGGGCCCGGCCGT TGAGCGGATCGAAAAATCAGTGATGAAATCGCTGGTCCTGACCGACACGATAGAGGCCACCGACGCTGTCGCGGCCTGTT CCAGCATCCGCGTCGTGCCCACCGCGCCGATGTTCGCGCAATCGATCCTGAATATCTGGAACGGAACGTCGGTGTCGTCG CTGTTTGACACGGCGTCCCTGGTCCCGATCTACGAAAGCCTCTATCCCAACGGCATGTGGGGCCGGTAG
Upstream 100 bases:
>100_bases AACTTTGCGTGGCCGCGGGGCCAGTGCTAGGGGGAGGCCAGTGTTTGAGGGGTGGCCGCGTGGGGACGGGTCTGGCCCCG CATCTTGGGGACGAAAGACC
Downstream 100 bases:
>100_bases ATCCATCAGACCTTGCGCGGCGCCACCGTAAAAATAGTCAGGATGATCGCCTGCCAGCCAACGTAAAGGGCTGCCAACCC TGGAATTTCCAGCGCGTCGT
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAAQDPKLISGNANKNLADAIARRMSMHRGMQVGLVDARVERFNDGEIFVEVYENVRGEDMFIIQPTSKPANDNLMELLI MADALRRSSAARITAVIPYFGYARQDRRTKARTPITAKLVANMIASGGIERVLTMDLHAAQIQGFFDMPVDNLYASPIFA LDILHQFGGDMSDVMVVSPDVGGVARARELATRIGAPLSIVDKRREKVGEVSDMTVIGDVTGKKCVIIDDIVDTAGTLCK AAEVLTEAGATEVHSYITHGVMSGPAVERIEKSVMKSLVLTDTIEATDAVAACSSIRVVPTAPMFAQSILNIWNGTSVSS LFDTASLVPIYESLYPNGMWGR
Sequences:
>Translated_342_residues MAAQDPKLISGNANKNLADAIARRMSMHRGMQVGLVDARVERFNDGEIFVEVYENVRGEDMFIIQPTSKPANDNLMELLI MADALRRSSAARITAVIPYFGYARQDRRTKARTPITAKLVANMIASGGIERVLTMDLHAAQIQGFFDMPVDNLYASPIFA LDILHQFGGDMSDVMVVSPDVGGVARARELATRIGAPLSIVDKRREKVGEVSDMTVIGDVTGKKCVIIDDIVDTAGTLCK AAEVLTEAGATEVHSYITHGVMSGPAVERIEKSVMKSLVLTDTIEATDAVAACSSIRVVPTAPMFAQSILNIWNGTSVSS LFDTASLVPIYESLYPNGMWGR >Mature_341_residues AAQDPKLISGNANKNLADAIARRMSMHRGMQVGLVDARVERFNDGEIFVEVYENVRGEDMFIIQPTSKPANDNLMELLIM ADALRRSSAARITAVIPYFGYARQDRRTKARTPITAKLVANMIASGGIERVLTMDLHAAQIQGFFDMPVDNLYASPIFAL DILHQFGGDMSDVMVVSPDVGGVARARELATRIGAPLSIVDKRREKVGEVSDMTVIGDVTGKKCVIIDDIVDTAGTLCKA AEVLTEAGATEVHSYITHGVMSGPAVERIEKSVMKSLVLTDTIEATDAVAACSSIRVVPTAPMFAQSILNIWNGTSVSSL FDTASLVPIYESLYPNGMWGR
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506127, Length=324, Percent_Identity=44.4444444444444, Blast_Score=288, Evalue=4e-78, Organism=Homo sapiens, GI4506129, Length=323, Percent_Identity=43.9628482972136, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI84875539, Length=326, Percent_Identity=43.558282208589, Blast_Score=281, Evalue=8e-76, Organism=Homo sapiens, GI28557709, Length=324, Percent_Identity=43.2098765432099, Blast_Score=279, Evalue=3e-75, Organism=Homo sapiens, GI4506133, Length=351, Percent_Identity=34.4729344729345, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI194018537, Length=346, Percent_Identity=33.5260115606936, Blast_Score=171, Evalue=8e-43, Organism=Homo sapiens, GI310128524, Length=147, Percent_Identity=32.6530612244898, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI310115209, Length=147, Percent_Identity=32.6530612244898, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI310118259, Length=147, Percent_Identity=32.6530612244898, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI310119946, Length=147, Percent_Identity=32.6530612244898, Blast_Score=85, Evalue=1e-16, Organism=Escherichia coli, GI1787458, Length=321, Percent_Identity=51.0903426791277, Blast_Score=319, Evalue=1e-88, Organism=Caenorhabditis elegans, GI17554704, Length=325, Percent_Identity=42.7692307692308, Blast_Score=279, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17554702, Length=324, Percent_Identity=42.9012345679012, Blast_Score=278, Evalue=2e-75, Organism=Caenorhabditis elegans, GI25149168, Length=324, Percent_Identity=42.9012345679012, Blast_Score=278, Evalue=3e-75, Organism=Caenorhabditis elegans, GI71989924, Length=324, Percent_Identity=42.9012345679012, Blast_Score=277, Evalue=5e-75, Organism=Caenorhabditis elegans, GI17570245, Length=347, Percent_Identity=30.5475504322767, Blast_Score=171, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6321776, Length=328, Percent_Identity=43.5975609756098, Blast_Score=269, Evalue=5e-73, Organism=Saccharomyces cerevisiae, GI6319403, Length=327, Percent_Identity=42.5076452599388, Blast_Score=260, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6320946, Length=327, Percent_Identity=41.8960244648318, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6322667, Length=203, Percent_Identity=37.9310344827586, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6324511, Length=115, Percent_Identity=37.3913043478261, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI21355239, Length=316, Percent_Identity=44.3037974683544, Blast_Score=280, Evalue=8e-76, Organism=Drosophila melanogaster, GI45551540, Length=339, Percent_Identity=41.2979351032448, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI24651458, Length=363, Percent_Identity=33.0578512396694, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI24651456, Length=363, Percent_Identity=33.0578512396694, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI281362873, Length=363, Percent_Identity=33.0578512396694, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI24651454, Length=363, Percent_Identity=33.0578512396694, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI24651462, Length=200, Percent_Identity=39, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24651464, Length=200, Percent_Identity=39, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI45552010, Length=194, Percent_Identity=40.2061855670103, Blast_Score=143, Evalue=2e-34,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 37011; Mature: 36880
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQDPKLISGNANKNLADAIARRMSMHRGMQVGLVDARVERFNDGEIFVEVYENVRGED CCCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCEEHEEHHCCCCCE MFIIQPTSKPANDNLMELLIMADALRRSSAARITAVIPYFGYARQDRRTKARTPITAKLV EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHCCHHHHHHHHCCCCHHHHHH ANMIASGGIERVLTMDLHAAQIQGFFDMPVDNLYASPIFALDILHQFGGDMSDVMVVSPD HHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCEEEECCC VGGVARARELATRIGAPLSIVDKRREKVGEVSDMTVIGDVTGKKCVIIDDIVDTAGTLCK CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHH AAEVLTEAGATEVHSYITHGVMSGPAVERIEKSVMKSLVLTDTIEATDAVAACSSIRVVP HHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC TAPMFAQSILNIWNGTSVSSLFDTASLVPIYESLYPNGMWGR CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AAQDPKLISGNANKNLADAIARRMSMHRGMQVGLVDARVERFNDGEIFVEVYENVRGED CCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCEEHEEHHCCCCCE MFIIQPTSKPANDNLMELLIMADALRRSSAARITAVIPYFGYARQDRRTKARTPITAKLV EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHCCHHHHHHHHCCCCHHHHHH ANMIASGGIERVLTMDLHAAQIQGFFDMPVDNLYASPIFALDILHQFGGDMSDVMVVSPD HHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHCCCCCCEEEECCC VGGVARARELATRIGAPLSIVDKRREKVGEVSDMTVIGDVTGKKCVIIDDIVDTAGTLCK CCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHH AAEVLTEAGATEVHSYITHGVMSGPAVERIEKSVMKSLVLTDTIEATDAVAACSSIRVVP HHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEC TAPMFAQSILNIWNGTSVSSLFDTASLVPIYESLYPNGMWGR CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA