Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053522

Identifier: 89053522

GI number: 89053522

Start: 983326

End: 984069

Strand: Reverse

Name: 89053522

Synonym: Jann_1031

Alternate gene names: NA

Gene position: 984069-983326 (Counterclockwise)

Preceding gene: 89053523

Following gene: 89053521

Centisome position: 22.79

GC content: 63.44

Gene sequence:

>744_bases
ATGAGCAATACCGAGGCGGGAGCCCCGCTCTCCACCCATGAAGAATCCCCAACACTTGACTGGCGCGACCGCGCGCTGGC
CGACCCGGAGTTGATTCTGGAAGACCGCGACCTGATGCGTGCGCTGATCTCCGCCAATGACCGTCAGATGGGCGGAAATA
TCGTCGATATGCGCGGCATCGCGATGGAGCGTTTGCAGAATCGCCTTGATCGGCTGGAAGACACCCACCGCTCGGTCATA
GCGGCGGCCTATGAAAATCTGGCAGGCACCAACCAGATCCACCGCTCCATCATTCGGCTGCTGGACGCCAAGGAATTCAC
CGAGTTCCTGACGATGCTTGGCACCGATGTGGCGGGCATTCTGCGGGTGGACCGGGTGCGGCTGGTTCTGGAAAGCGCCG
AAGCGACGGAGACCGAGGCCCCCAAAGTCCAGAAACTGGAAGACGTGCTGACCATTGTCGCCCCCGGCTTCGTGAAAGAC
TATGTCACCGGTGCGCGCGACGTGCCCCACCGCCAGGTCAGCCTGCGCCAGGTGGGCGGCGATGCAGAGCGCATTTTCGG
CGAAGCCTCCCGCTGGATCCATTCGGAAGCCTGCCTGACGCTCGATCTGGGCGAAGGCCGGCTGCCGGGCCTGCTGGTCA
TGGGCGCGGAAGATCCGCACCAGTTCCGCCCCTCGCAAGGCACGGATCTGCTGACGTTCTTCGCGGGCGTGTTTGAACGC
CTCATGCGCGGCTGGCTGGATTAG

Upstream 100 bases:

>100_bases
ACCCCTGACCCAACTGCGCGGGCGCGTCGTGAAATGTCTCGCCCGCCCGCGCATGGCTATGGTATGCATCCTCAACGATA
AAAAAGTTGAGGCAGTACCG

Downstream 100 bases:

>100_bases
GCCCATGTCACTCGCGCTGACCCCGGCGGTGCGTGATCTGTTGGCGGGCTGGCTGACCCACCTGCGCGGTGTGCGCGGGC
GGGCGGAAGCCACGCTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGIAMERLQNRLDRLEDTHRSVI
AAAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGILRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKD
YVTGARDVPHRQVSLRQVGGDAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFER
LMRGWLD

Sequences:

>Translated_247_residues
MSNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGIAMERLQNRLDRLEDTHRSVI
AAAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGILRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKD
YVTGARDVPHRQVSLRQVGGDAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFER
LMRGWLD
>Mature_246_residues
SNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGIAMERLQNRLDRLEDTHRSVIA
AAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGILRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKDY
VTGARDVPHRQVSLRQVGGDAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFERL
MRGWLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27560; Mature: 27428

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGI
CCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCEEHHHHH
AMERLQNRLDRLEDTHRSVIAAAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKDYVTGARDVPHRQVSLRQVGG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCC
DAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFER
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCHHCCCCCCCHHHHHHHHHHHH
LMRGWLD
HHHHCCC
>Mature Secondary Structure 
SNTEAGAPLSTHEESPTLDWRDRALADPELILEDRDLMRALISANDRQMGGNIVDMRGI
CCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCEEHHHHH
AMERLQNRLDRLEDTHRSVIAAAYENLAGTNQIHRSIIRLLDAKEFTEFLTMLGTDVAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LRVDRVRLVLESAEATETEAPKVQKLEDVLTIVAPGFVKDYVTGARDVPHRQVSLRQVGG
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCC
DAERIFGEASRWIHSEACLTLDLGEGRLPGLLVMGAEDPHQFRPSQGTDLLTFFAGVFER
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCHHCCCCCCCHHHHHHHHHHHH
LMRGWLD
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA