| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89053417
Identifier: 89053417
GI number: 89053417
Start: 882077
End: 883150
Strand: Reverse
Name: 89053417
Synonym: Jann_0926
Alternate gene names: NA
Gene position: 883150-882077 (Counterclockwise)
Preceding gene: 89053419
Following gene: 89053416
Centisome position: 20.45
GC content: 67.13
Gene sequence:
>1074_bases ATGACTTACGATTTTCTGATCATCGGCGGTGGAATTGCCGGCACATCCGCCGGGGCGGCTCTCTCGCGCCTCGGCACCAC CTGCCTGTTGGAGGCTGAAAGCGCGTTGGCCTATCACGCCTCGGGCCGATCTGCCGCGCTGTTTGAGCCGAATTACGGGC ATCCCGTCACGGTGGATCTCAGCCATGCCTCGGCCACCGCGTTGCGCACGCTTGGCGGCGGTGTCCTGTCGCCCCGCGGC CTGCTCATCCTCGCGGGACCCGGAGAGGACGCGGCGCTGGCCCGCGACATCAAGACGATGGATCTGGCCGAGATTTCCAT CGCCGACGCCCAGGACATGATCCCGATCCTCAACGCCGATCATATCACCCGCGCAGCCCACCACGCGGCGGCCTGGGATA TCGACACCGACCGCATGGTCCAGCACTACGCCCGCCAGATCCGGACCAATGGCGCGGTGGAGACCGGCGCAACCGTCCTC GGCCTCACCAAAACGCCGCAGGGCTGGACGGTGGAGACCCGGGATCACAGTTTTCACGCGCGCATCATCGTCAATGCGGC GGGGGCCTGGGCCGACGACATCGCGCGGATGGCGGGCATTGCGCCCATCGGCCTGACGCCCAAGCGCCGCTCCATGGCGC GAATGCCCGCCCCGCGGGGACACGATGTCTCTGCCTGGCCGATGATCATCGGTGCGGGGGAAAGCTGGTATGCCAAACCC GACGCGGGCGCCTGGCTGGTATCTCCGGCCGAAGAAGACCCGGCCGCGCCACACGATGCCTATGCCGATGACATGGTGCT GGCGGAAGGGATCGCCCGCTACCAGCCCTTCGTCACCGAAGAGGTCACGCGCGTCACATCCTCCTGGGCGGGCCTCAGGA CCTTCGCCCCGGACCGCTGCTTGGTGATCGGACCGGACCGCACGGACCCGTCGGTTTTGTGGTTCGCGGGCCAGGGCGGC TATGGGTTTCAGACGGCCCCTGCGGCCAGTCAGCTATTGGCCGATCTCGTCTCGGGTGCACCGTCCACCCTTGATCCCGC GACGGTAAAGGCCCTGTCTCCATCGCGCTTTTGA
Upstream 100 bases:
>100_bases TGCTGTCTGGGATGGCGGACGGGCTGCGTATGCGCCTCTGTGATTGAGACCTCCCGTTCCCAACTTGTCTCGGCGTGCCG GCCCCCATAGCGTTCGCCCC
Downstream 100 bases:
>100_bases CCGACTTGCCGCGTGACCGGATCAGGCCGTGCGATCCGTGATTCTGCCCAGCCCGATTAAAAGGTGCGGAAACCCCGAAC TTGGAACTCCCCGCCAGAGG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Glycine/D-Amino Acid Oxidase; Amino Acid Oxidase; FAD-Dependent Oxidoreductase; FAD Dependent Oxidoreductase Domain-Containing Protein; Glycine Oxidase; FAD Dependent Oxidoreductase Family; Oxidase; FAD-Dependent Glycerol-3-Phosphate Dehydrogenase Protein; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTYDFLIIGGGIAGTSAGAALSRLGTTCLLEAESALAYHASGRSAALFEPNYGHPVTVDLSHASATALRTLGGGVLSPRG LLILAGPGEDAALARDIKTMDLAEISIADAQDMIPILNADHITRAAHHAAAWDIDTDRMVQHYARQIRTNGAVETGATVL GLTKTPQGWTVETRDHSFHARIIVNAAGAWADDIARMAGIAPIGLTPKRRSMARMPAPRGHDVSAWPMIIGAGESWYAKP DAGAWLVSPAEEDPAAPHDAYADDMVLAEGIARYQPFVTEEVTRVTSSWAGLRTFAPDRCLVIGPDRTDPSVLWFAGQGG YGFQTAPAASQLLADLVSGAPSTLDPATVKALSPSRF
Sequences:
>Translated_357_residues MTYDFLIIGGGIAGTSAGAALSRLGTTCLLEAESALAYHASGRSAALFEPNYGHPVTVDLSHASATALRTLGGGVLSPRG LLILAGPGEDAALARDIKTMDLAEISIADAQDMIPILNADHITRAAHHAAAWDIDTDRMVQHYARQIRTNGAVETGATVL GLTKTPQGWTVETRDHSFHARIIVNAAGAWADDIARMAGIAPIGLTPKRRSMARMPAPRGHDVSAWPMIIGAGESWYAKP DAGAWLVSPAEEDPAAPHDAYADDMVLAEGIARYQPFVTEEVTRVTSSWAGLRTFAPDRCLVIGPDRTDPSVLWFAGQGG YGFQTAPAASQLLADLVSGAPSTLDPATVKALSPSRF >Mature_356_residues TYDFLIIGGGIAGTSAGAALSRLGTTCLLEAESALAYHASGRSAALFEPNYGHPVTVDLSHASATALRTLGGGVLSPRGL LILAGPGEDAALARDIKTMDLAEISIADAQDMIPILNADHITRAAHHAAAWDIDTDRMVQHYARQIRTNGAVETGATVLG LTKTPQGWTVETRDHSFHARIIVNAAGAWADDIARMAGIAPIGLTPKRRSMARMPAPRGHDVSAWPMIIGAGESWYAKPD AGAWLVSPAEEDPAAPHDAYADDMVLAEGIARYQPFVTEEVTRVTSSWAGLRTFAPDRCLVIGPDRTDPSVLWFAGQGGY GFQTAPAASQLLADLVSGAPSTLDPATVKALSPSRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37553; Mature: 37422
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYDFLIIGGGIAGTSAGAALSRLGTTCLLEAESALAYHASGRSAALFEPNYGHPVTVDL CCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEECCCCCCEEEEEE SHASATALRTLGGGVLSPRGLLILAGPGEDAALARDIKTMDLAEISIADAQDMIPILNAD CCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHCCHHCCCEEEECCHHHCCCCCCCH HITRAAHHAAAWDIDTDRMVQHYARQIRTNGAVETGATVLGLTKTPQGWTVETRDHSFHA HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCCCEEEECCCCEEE RIIVNAAGAWADDIARMAGIAPIGLTPKRRSMARMPAPRGHDVSAWPMIIGAGESWYAKP EEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCC DAGAWLVSPAEEDPAAPHDAYADDMVLAEGIARYQPFVTEEVTRVTSSWAGLRTFAPDRC CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCE LVIGPDRTDPSVLWFAGQGGYGFQTAPAASQLLADLVSGAPSTLDPATVKALSPSRF EEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHEECCCCCCC >Mature Secondary Structure TYDFLIIGGGIAGTSAGAALSRLGTTCLLEAESALAYHASGRSAALFEPNYGHPVTVDL CEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEECCCCCCEEEEEE SHASATALRTLGGGVLSPRGLLILAGPGEDAALARDIKTMDLAEISIADAQDMIPILNAD CCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHCCHHCCCEEEECCHHHCCCCCCCH HITRAAHHAAAWDIDTDRMVQHYARQIRTNGAVETGATVLGLTKTPQGWTVETRDHSFHA HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCCCEEEECCCCEEE RIIVNAAGAWADDIARMAGIAPIGLTPKRRSMARMPAPRGHDVSAWPMIIGAGESWYAKP EEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCC DAGAWLVSPAEEDPAAPHDAYADDMVLAEGIARYQPFVTEEVTRVTSSWAGLRTFAPDRC CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCE LVIGPDRTDPSVLWFAGQGGYGFQTAPAASQLLADLVSGAPSTLDPATVKALSPSRF EEECCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA