Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053419

Identifier: 89053419

GI number: 89053419

Start: 884085

End: 885167

Strand: Reverse

Name: 89053419

Synonym: Jann_0928

Alternate gene names: NA

Gene position: 885167-884085 (Counterclockwise)

Preceding gene: 89053420

Following gene: 89053417

Centisome position: 20.5

GC content: 62.7

Gene sequence:

>1083_bases
ATGAAACTCACCACCAAACTAATGACCAGTGCTGCGCTGGCCATGGGCCTGACGGGGGCGGCGATCGCGCAAGACGATCC
GTTCCAGATAGGGTTTGTCTATGTCGGGCCAATTGGCGATTACGGCTGGACCTGGACCCACGATCAGGGCCGTCTCGCCG
TGGAAGAGGCGTTCGGCGACGATGTCGAAACGGTCTTCGCGGAAAGTGTGCCAGAGGGCGCGGACGCCGAGCGCGTCATT
CAGAACATGGTTCTGGGCGGCGCGGACATGATCTTCACCACCTCCTTCGGCTATGGCGAAGCGACAAATGCCGTCGCGGG
CCAGTTCCCCGACGTCTATTTCGAACACGCCACCGGCTACCTGCGCGAACATGAAAACGTGTCGACCTATTCGGCACGCT
TCTATCAGGGCCGCGCCGTCATCGGCCACATCGCGGGCCAGATGACCGAATCCAACATCGTGGGCTACATCGCATCCTAT
CCGATCCCCGAAGTGATCCGGGGCATCAATGCCGCGTATCTGCACGCGCGCGAAGTGAACCCGGATGTCGAGTTCCGCGT
GATCTGGGTCTACACATGGTTCGATCCGGCGGAAGAAGCCTCTGCCGCCCAGGCCCTGATTGATGCGGGTGCAGACGTGA
TCATGCAGCACACCGACAGCACCGCACCGCAGGCCGCGGCCCAGGAAGCGGGCAATGTCTACACCTTCGGCCAGGCCTCT
GACATGATCCAGTTCGCGCCCACGCCGCGGATCTCGTCGATCATCGACAATTGGGGCCCCTACTACGTTCGCCGCGTCGG
TGAGGCGATGGAGGGCACCTGGGCGCAATCCGACACCTGGGAAGGCATGACCGAAGGCATGGTCGTGATCGGCGAGATGA
CCGATGCGATCCCGGAAGAGGTGCGCGCCTCGGCGCTGGACCTGATGGAAGGGATGCAGAGCGGCACGTACCACCCCTTC
ACCGGCCCGATCAACCGGCAGGACGGCACCGCATGGCTGGCCGATGGCGAGGTCGCCGATGACGGTACGCTTGCGGGCAT
GGACTTCTATGTGGAAGGGATCACGGGCGAAATCCCGAACTGA

Upstream 100 bases:

>100_bases
CTCCCAAAAGCGCATCGCCGGTTCAGGTCGACATGCGCCCCGGGACACCGGCCCTGCCATCAGATACAGAGACACCAGAA
TCCAACAGAGGGGATGATTC

Downstream 100 bases:

>100_bases
TCGCGTCTTCGGCACGGCAACGAAAAAGGCCCGCTGATCATCCAGCGGGCCTTTCTTATGGCGATTGGGACGCGTTAGGT
CCGGTGTTTGCGGCGGGCCA

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; ABC Transporter Periplasmic/Surface Lipoprotein; ABC Transporter; Lipoprotein Periplasmic Protein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Twin-Arginine Translocation Pathway Signal; Outer Membrane Lipoprotein; Transcriptional Activator Of ComK Gene; Tat Pathway Signal Sequence/Basic Membrane Protein; Basic Membrane Lipoprotein Family Protein; Basic Membrane Protein Family Protein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; ABC-Type Transport Periplasmic Component

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKLTTKLMTSAALAMGLTGAAIAQDDPFQIGFVYVGPIGDYGWTWTHDQGRLAVEEAFGDDVETVFAESVPEGADAERVI
QNMVLGGADMIFTTSFGYGEATNAVAGQFPDVYFEHATGYLREHENVSTYSARFYQGRAVIGHIAGQMTESNIVGYIASY
PIPEVIRGINAAYLHAREVNPDVEFRVIWVYTWFDPAEEASAAQALIDAGADVIMQHTDSTAPQAAAQEAGNVYTFGQAS
DMIQFAPTPRISSIIDNWGPYYVRRVGEAMEGTWAQSDTWEGMTEGMVVIGEMTDAIPEEVRASALDLMEGMQSGTYHPF
TGPINRQDGTAWLADGEVADDGTLAGMDFYVEGITGEIPN

Sequences:

>Translated_360_residues
MKLTTKLMTSAALAMGLTGAAIAQDDPFQIGFVYVGPIGDYGWTWTHDQGRLAVEEAFGDDVETVFAESVPEGADAERVI
QNMVLGGADMIFTTSFGYGEATNAVAGQFPDVYFEHATGYLREHENVSTYSARFYQGRAVIGHIAGQMTESNIVGYIASY
PIPEVIRGINAAYLHAREVNPDVEFRVIWVYTWFDPAEEASAAQALIDAGADVIMQHTDSTAPQAAAQEAGNVYTFGQAS
DMIQFAPTPRISSIIDNWGPYYVRRVGEAMEGTWAQSDTWEGMTEGMVVIGEMTDAIPEEVRASALDLMEGMQSGTYHPF
TGPINRQDGTAWLADGEVADDGTLAGMDFYVEGITGEIPN
>Mature_360_residues
MKLTTKLMTSAALAMGLTGAAIAQDDPFQIGFVYVGPIGDYGWTWTHDQGRLAVEEAFGDDVETVFAESVPEGADAERVI
QNMVLGGADMIFTTSFGYGEATNAVAGQFPDVYFEHATGYLREHENVSTYSARFYQGRAVIGHIAGQMTESNIVGYIASY
PIPEVIRGINAAYLHAREVNPDVEFRVIWVYTWFDPAEEASAAQALIDAGADVIMQHTDSTAPQAAAQEAGNVYTFGQAS
DMIQFAPTPRISSIIDNWGPYYVRRVGEAMEGTWAQSDTWEGMTEGMVVIGEMTDAIPEEVRASALDLMEGMQSGTYHPF
TGPINRQDGTAWLADGEVADDGTLAGMDFYVEGITGEIPN

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39001; Mature: 39001

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTTKLMTSAALAMGLTGAAIAQDDPFQIGFVYVGPIGDYGWTWTHDQGRLAVEEAFGD
CCCHHHHHHHHHHHHCCCCCEECCCCCEEEEEEEEECCCCCCCEEECCCCCEEEHHHCCC
DVETVFAESVPEGADAERVIQNMVLGGADMIFTTSFGYGEATNAVAGQFPDVYFEHATGY
CHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHCCCCHHHHHHHHHH
LREHENVSTYSARFYQGRAVIGHIAGQMTESNIVGYIASYPIPEVIRGINAAYLHAREVN
HHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEHHCCCHHHHHHCCCCEEEEEEECC
PDVEFRVIWVYTWFDPAEEASAAQALIDAGADVIMQHTDSTAPQAAAQEAGNVYTFGQAS
CCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCEEEECCCC
DMIQFAPTPRISSIIDNWGPYYVRRVGEAMEGTWAQSDTWEGMTEGMVVIGEMTDAIPEE
CCEEECCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHH
VRASALDLMEGMQSGTYHPFTGPINRQDGTAWLADGEVADDGTLAGMDFYVEGITGEIPN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCCEEECCEEEEECCCCCCCC
>Mature Secondary Structure
MKLTTKLMTSAALAMGLTGAAIAQDDPFQIGFVYVGPIGDYGWTWTHDQGRLAVEEAFGD
CCCHHHHHHHHHHHHCCCCCEECCCCCEEEEEEEEECCCCCCCEEECCCCCEEEHHHCCC
DVETVFAESVPEGADAERVIQNMVLGGADMIFTTSFGYGEATNAVAGQFPDVYFEHATGY
CHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHCCCCHHHHHHHHHH
LREHENVSTYSARFYQGRAVIGHIAGQMTESNIVGYIASYPIPEVIRGINAAYLHAREVN
HHHCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEHHCCCHHHHHHCCCCEEEEEEECC
PDVEFRVIWVYTWFDPAEEASAAQALIDAGADVIMQHTDSTAPQAAAQEAGNVYTFGQAS
CCCEEEEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCEEEECCCC
DMIQFAPTPRISSIIDNWGPYYVRRVGEAMEGTWAQSDTWEGMTEGMVVIGEMTDAIPEE
CCEEECCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHH
VRASALDLMEGMQSGTYHPFTGPINRQDGTAWLADGEVADDGTLAGMDFYVEGITGEIPN
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCCEEECCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA