Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053263

Identifier: 89053263

GI number: 89053263

Start: 731621

End: 732691

Strand: Reverse

Name: 89053263

Synonym: Jann_0772

Alternate gene names: NA

Gene position: 732691-731621 (Counterclockwise)

Preceding gene: 89053264

Following gene: 89053256

Centisome position: 16.97

GC content: 69.28

Gene sequence:

>1071_bases
ATGTCCGGTGCCAGAGACGGCGCATTTGCAAGCGCGCGGGATATTTCGGGGCACGGTTCCGCATCTGAGTGCCCTGCCAT
GATGGTGCCGGGGCTGCGAAACCTGATCACCGATGTGGCGGGGCTGCGCGTGGGCAACGCGCAGGACGCGGGGTTGAAGT
CCGGGGCGACGGTGCTGGTCGGAGACGCGCCGTTCACTGCCGCCGTCCACGTCATGGGCGGCGCGCCGGGGACGAGAGAG
ACGGACCTGCTGGCACCGGACAAGACGGTACAGAACGCGGATGCGCTGGTGTTGTCGGGGGGGTCGGCCTTCGGCCTCGA
CGCGGCCTCCGGCGTGGCGGACGCCCTGCGGGCGCAGGGCAGAGGGTTCCAGGTTGGCGATCAAGTGGTGCCGATTGTCC
CTGCCGCGATCCTGTTTGATCTGATCAATGGCGGCGACAAGACCTGGGACGTGAACCCCTATGGGGCGCTTGGGCGGGAG
GCGTTGGCCGATGCGGATGCGGATTTTACCCTCGGCACCAGCGGCGCGGGCACCGGCGCGTTGATCGCAGATATGAAGGG
CGGACTTGGCTCGGCATCCCTGCGGGTTGGCCGCTATACCGTGGGCGCGTTGGTGGCCGTCAACGCCCTGGGCCGCGTGA
CGGTGGGCGACAGCCGCCACTTCTGGGCCGCGCCCTTCGAGATGGACGCCGAGTTCGGCGGGCACGGCCCCGCACCGGCG
TTCAACGCGCAGGCCCTGCCCCCGGTCAAAGGCGGCGCGCAGAACACCACCATCGCCATTGTCGCCACCGATGCAGGCCT
GACGCAGGCCCAGGCCACGCGGATGGCCGTGGCGGCCCATGACGGGATGGCGCGCGCGATCTATCCCAGCCACACACCGA
TGGATGGGGACCTCGTCTTTGCTGCCGCCACAGGCGCGCAGCCGTTGTCGGATGAGGGCGACCCGCTGATGCTTGGCCAT
GCGGCCGCCCTTTGCCTGTCCCGCGCCATCGCAAGGGGCGTGTTCGAGGCGACAGCGGAAGACGGTGACGTCATGCCCAC
CTATGGGGCCATGTTCGGCCTGCCCGGCTGA

Upstream 100 bases:

>100_bases
CACGGCTGCGGGCGTATTTCGAAGTCTCCGTGGTGCGGGAGCTGGCGGATTGTGCCGGGACATTGGTGCTGATCTTGCCT
GCGGCGTTTGCCGGGGCGGA

Downstream 100 bases:

>100_bases
CCTCCCAACAGACCAGAACTGCCAGGGACATTATGCCCGCATCAGACGCATAAATCGCGACAGCCCGGCACCGAGCGCGG
CCCCCACACAGGCGCCGATC

Product: peptidase S58, DmpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MSGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLVGDAPFTAAVHVMGGAPGTRE
TDLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQGRGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGRE
ALADADADFTLGTSGAGTGALIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPA
FNAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVFAAATGAQPLSDEGDPLMLGH
AAALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG

Sequences:

>Translated_356_residues
MSGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLVGDAPFTAAVHVMGGAPGTRE
TDLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQGRGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGRE
ALADADADFTLGTSGAGTGALIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPA
FNAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVFAAATGAQPLSDEGDPLMLGH
AAALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG
>Mature_355_residues
SGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLVGDAPFTAAVHVMGGAPGTRET
DLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQGRGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGREA
LADADADFTLGTSGAGTGALIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPAF
NAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVFAAATGAQPLSDEGDPLMLGHA
AALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG

Specific function: Unknown

COG id: COG3191

COG function: function code EQ; L-aminopeptidase/D-esterase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1333 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016117
- InterPro:   IPR005321 [H]

Pfam domain/function: PF03576 Peptidase_S58 [H]

EC number: NA

Molecular weight: Translated: 35523; Mature: 35392

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
GDAPFTAAVHVMGGAPGTRETDLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQG
ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
RGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGREALADADADFTLGTSGAGTGA
CCCCCCCEEHHHHHHHHHHHHHCCCCCEEECCCCCHHCHHHHHCCCCCEEECCCCCCCCE
LIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPA
EEEECCCCCCCCEEEECHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCCCCCCCCCC
FNAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVF
CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHEEEEECCCCEEEECCCCCCCCCCEEE
AAATGAQPLSDEGDPLMLGHAAALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG
EEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
SGARDGAFASARDISGHGSASECPAMMVPGLRNLITDVAGLRVGNAQDAGLKSGATVLV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
GDAPFTAAVHVMGGAPGTRETDLLAPDKTVQNADALVLSGGSAFGLDAASGVADALRAQG
ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
RGFQVGDQVVPIVPAAILFDLINGGDKTWDVNPYGALGREALADADADFTLGTSGAGTGA
CCCCCCCEEHHHHHHHHHHHHHCCCCCEEECCCCCHHCHHHHHCCCCCEEECCCCCCCCE
LIADMKGGLGSASLRVGRYTVGALVAVNALGRVTVGDSRHFWAAPFEMDAEFGGHGPAPA
EEEECCCCCCCCEEEECHHHHHHHHHHHHCCEEEECCCCCEEECCCCCCCCCCCCCCCCC
FNAQALPPVKGGAQNTTIAIVATDAGLTQAQATRMAVAAHDGMARAIYPSHTPMDGDLVF
CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHEEEEECCCCEEEECCCCCCCCCCEEE
AAATGAQPLSDEGDPLMLGHAAALCLSRAIARGVFEATAEDGDVMPTYGAMFGLPG
EEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]