| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053234
Identifier: 89053234
GI number: 89053234
Start: 712406
End: 712972
Strand: Reverse
Name: 89053234
Synonym: Jann_0743
Alternate gene names: NA
Gene position: 712972-712406 (Counterclockwise)
Preceding gene: 89053235
Following gene: 89053233
Centisome position: 16.51
GC content: 56.97
Gene sequence:
>567_bases TTGGACTTTCGCCGCTCTCGCTGGATTCCTCTGGGCAGCACCCCTTGCCTACCTCGTTTGGCAGGGTCTGGATTATGGCG GCAGTTTTCTGGGCATAGTAGTGGTGGCGATGTTTTTCCTCGTGATGCCATCCTTTGGTCTAGGCGTCGGCGTCATTGCT ATCCTGCTCGACACGCTATCTGCGCGTGTATGGCGCCCATTGGCAATCGTACCGGGATGCCTGCTCTGCGGTTTAATCTT TTTTGGCGCAGGACGGGCGTTAACTTTGATTTAGGCGCCCATAGCGAGCACGATCTAAAGCTCAGCCTACCCCTTGATAC ACAGCCCCGCGCCGCATATACGCCACTTGTTCGCGGTTGGAATCAGCCTGTGGACCTTGGTGCTATGGGTGATCCGCGAA GTTTCGGCGCGGGCAACAGCCTCGGCACCACCCAGCGAATGAAGCATGCGCCACCTCTGGCGGGCACCTTGCTGCGAGGC AAGCTGGACCCGGTCGAAAATCAGAGCTCTAGGGCAGACGAAAAATCAAGCGGTCAAACCGCAGCATATAAGGAGCGTTT CAGATGA
Upstream 100 bases:
>100_bases TGATGGAACCCCCAAACCTTCTCACCATGTTAAGTGTTGCCTCATCACTTCCGCTATCAATCTGCCTCTTTGCATTCAAT AAGAGGTACCCTCGGTTAGC
Downstream 100 bases:
>100_bases ACCTGATCGCACAATTGGAAGCCGAGCAAGTCGAAGCACTTGCCAAGGACATTCCGGATTTCAAGGCGGGCGACACCGTT CGCGTCGGCTTCCGGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MDFRRSRWIPLGSTPCLPRLAGSGLWRQFSGHSSGGDVFPRDAILWSRRRRHCYPARHAICACMAPIGNRTGMPALRFNL FWRRTGVNFDLGAHSEHDLKLSLPLDTQPRAAYTPLVRGWNQPVDLGAMGDPRSFGAGNSLGTTQRMKHAPPLAGTLLRG KLDPVENQSSRADEKSSGQTAAYKERFR
Sequences:
>Translated_188_residues MDFRRSRWIPLGSTPCLPRLAGSGLWRQFSGHSSGGDVFPRDAILWSRRRRHCYPARHAICACMAPIGNRTGMPALRFNL FWRRTGVNFDLGAHSEHDLKLSLPLDTQPRAAYTPLVRGWNQPVDLGAMGDPRSFGAGNSLGTTQRMKHAPPLAGTLLRG KLDPVENQSSRADEKSSGQTAAYKERFR >Mature_188_residues MDFRRSRWIPLGSTPCLPRLAGSGLWRQFSGHSSGGDVFPRDAILWSRRRRHCYPARHAICACMAPIGNRTGMPALRFNL FWRRTGVNFDLGAHSEHDLKLSLPLDTQPRAAYTPLVRGWNQPVDLGAMGDPRSFGAGNSLGTTQRMKHAPPLAGTLLRG KLDPVENQSSRADEKSSGQTAAYKERFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20925; Mature: 20925
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFRRSRWIPLGSTPCLPRLAGSGLWRQFSGHSSGGDVFPRDAILWSRRRRHCYPARHAI CCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH CACMAPIGNRTGMPALRFNLFWRRTGVNFDLGAHSEHDLKLSLPLDTQPRAAYTPLVRGW HHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCC NQPVDLGAMGDPRSFGAGNSLGTTQRMKHAPPLAGTLLRGKLDPVENQSSRADEKSSGQT CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC AAYKERFR HHHHHHCC >Mature Secondary Structure MDFRRSRWIPLGSTPCLPRLAGSGLWRQFSGHSSGGDVFPRDAILWSRRRRHCYPARHAI CCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHH CACMAPIGNRTGMPALRFNLFWRRTGVNFDLGAHSEHDLKLSLPLDTQPRAAYTPLVRGW HHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCC NQPVDLGAMGDPRSFGAGNSLGTTQRMKHAPPLAGTLLRGKLDPVENQSSRADEKSSGQT CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC AAYKERFR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA