| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053219
Identifier: 89053219
GI number: 89053219
Start: 697779
End: 698741
Strand: Reverse
Name: 89053219
Synonym: Jann_0728
Alternate gene names: NA
Gene position: 698741-697779 (Counterclockwise)
Preceding gene: 89053221
Following gene: 89053218
Centisome position: 16.18
GC content: 65.94
Gene sequence:
>963_bases ATGGAAAGACGCGACTTTATGACGGCAGGCTTGTCTGCGTCCGCCATCCTGGCGGCAGGCCCAGCCTTCGCGGAATGGGC GCCACGCCGCCCGATCAACGCGATCCTGCCCTATTCCGCAGGCGGCGGCACTGACGCGCTGGCGCGGGCGGCTGCGGCGG CGGCAGAGGGCATCCTTCCGGTGCCGCTGGTGATCGTGAACCGGCCGGGCTCGTCCGGTATCACAGGTGCGACGGAGGCC GCCGCGGCCCGTCCAGACGGCAATACGGTGATGGTCACCTCCGCGGGGTCGTTTCTGCTGACCTCCATGCTGCGCGACAC GGATGTAACCCCCTTCGACAGCTTTGAGATCATTGCCCAGATCGGGAATCTGACGCCTGCGGTCATCGTTCCCGCAAACA GCCCGTTCCAATCGGTGCAGGATCTGGTTGATGCCGCCAACGCCAACCCGGGCGCGTTGCGGTGGGCCCATAACGGGCGC GGCGGTTTCCACCATGTGGCCGGTCAGAGCTTTTTGGACCGCAACGGCCTTGAAGCCCAAGATGTGCCGTTCCAGGGGGG TGGGCCTACGCGAGCCGCCGTGATCGGGGAACAGGTGGATTTCGCCTTCGTCGGCATTCAGCAGGCCGCAGGTTTTGAGA ATGAGCTGCGCGTCCTTGCCCTCGCCGCACCGGAGCGGGATGCGATCCGCGATGATGTGCCGACGCTGCCGGAGCTTGGC TTCGACTATGTCGCCGTGTCCTCGCCCATTGTGTTCTTCGCGCCGATAGGCTCTGACCCGGAGGTCATCTCTGGCATGGA AGCGGCGTTGGAGGCAATCACGCAGACCGAGCAGTTCGCGGACCAGATGCGGGACCGGGGCAATGTGCCCGCCTTCCTCA GCGGGGCCGACACCGAAGCGCGACTGCGCCTGATGCAGGAACAGACCCAACCGGTGATCGACGCCTTGCGGTCGCAGGGC TAG
Upstream 100 bases:
>100_bases ATGCAATAATTGCGTTTTTTCTATGTTAGCACCTTCGCTAGGGTCGGGCGACAGATAAATCAGCGCCCAATTCAGGCGTT CATGTCTTTGGGAGGACATC
Downstream 100 bases:
>100_bases GGCAATGTCCGACGGGGCCGCTCCCGCCTCTCGGGCCGTTGGTGTGGCGCTGATCCTGATCGGGATTGGCGCCACGGTGA CGAGCATGGGGATCGGGCTG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILPVPLVIVNRPGSSGITGATEA AAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQIGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGR GGFHHVAGQSFLDRNGLEAQDVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEARLRLMQEQTQPVIDALRSQG
Sequences:
>Translated_320_residues MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILPVPLVIVNRPGSSGITGATEA AAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQIGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGR GGFHHVAGQSFLDRNGLEAQDVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEARLRLMQEQTQPVIDALRSQG >Mature_320_residues MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILPVPLVIVNRPGSSGITGATEA AAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQIGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGR GGFHHVAGQSFLDRNGLEAQDVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEARLRLMQEQTQPVIDALRSQG
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 - InterPro: IPR006311 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 33405; Mature: 33405
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILP CCCHHHHHCCCCCCHHHHCCCHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCC VPLVIVNRPGSSGITGATEAAAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQ CCEEEEECCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHH IGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGRGGFHHVAGQSFLDRNGLEAQ HCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCHHHHCCCCCCC DVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG CCCCCCCCCCHHHEECCCCCEEEEEHHHHCCCCCCEEEEEEECCCHHHHHCCCCCCHHCC FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEA CCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH RLRLMQEQTQPVIDALRSQG HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILP CCCHHHHHCCCCCCHHHHCCCHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCC VPLVIVNRPGSSGITGATEAAAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQ CCEEEEECCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHH IGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGRGGFHHVAGQSFLDRNGLEAQ HCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCHHHHCCCCCCC DVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG CCCCCCCCCCHHHEECCCCCEEEEEHHHHCCCCCCEEEEEEECCCHHHHHCCCCCCHHCC FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEA CCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH RLRLMQEQTQPVIDALRSQG HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7851418 [H]