Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053219

Identifier: 89053219

GI number: 89053219

Start: 697779

End: 698741

Strand: Reverse

Name: 89053219

Synonym: Jann_0728

Alternate gene names: NA

Gene position: 698741-697779 (Counterclockwise)

Preceding gene: 89053221

Following gene: 89053218

Centisome position: 16.18

GC content: 65.94

Gene sequence:

>963_bases
ATGGAAAGACGCGACTTTATGACGGCAGGCTTGTCTGCGTCCGCCATCCTGGCGGCAGGCCCAGCCTTCGCGGAATGGGC
GCCACGCCGCCCGATCAACGCGATCCTGCCCTATTCCGCAGGCGGCGGCACTGACGCGCTGGCGCGGGCGGCTGCGGCGG
CGGCAGAGGGCATCCTTCCGGTGCCGCTGGTGATCGTGAACCGGCCGGGCTCGTCCGGTATCACAGGTGCGACGGAGGCC
GCCGCGGCCCGTCCAGACGGCAATACGGTGATGGTCACCTCCGCGGGGTCGTTTCTGCTGACCTCCATGCTGCGCGACAC
GGATGTAACCCCCTTCGACAGCTTTGAGATCATTGCCCAGATCGGGAATCTGACGCCTGCGGTCATCGTTCCCGCAAACA
GCCCGTTCCAATCGGTGCAGGATCTGGTTGATGCCGCCAACGCCAACCCGGGCGCGTTGCGGTGGGCCCATAACGGGCGC
GGCGGTTTCCACCATGTGGCCGGTCAGAGCTTTTTGGACCGCAACGGCCTTGAAGCCCAAGATGTGCCGTTCCAGGGGGG
TGGGCCTACGCGAGCCGCCGTGATCGGGGAACAGGTGGATTTCGCCTTCGTCGGCATTCAGCAGGCCGCAGGTTTTGAGA
ATGAGCTGCGCGTCCTTGCCCTCGCCGCACCGGAGCGGGATGCGATCCGCGATGATGTGCCGACGCTGCCGGAGCTTGGC
TTCGACTATGTCGCCGTGTCCTCGCCCATTGTGTTCTTCGCGCCGATAGGCTCTGACCCGGAGGTCATCTCTGGCATGGA
AGCGGCGTTGGAGGCAATCACGCAGACCGAGCAGTTCGCGGACCAGATGCGGGACCGGGGCAATGTGCCCGCCTTCCTCA
GCGGGGCCGACACCGAAGCGCGACTGCGCCTGATGCAGGAACAGACCCAACCGGTGATCGACGCCTTGCGGTCGCAGGGC
TAG

Upstream 100 bases:

>100_bases
ATGCAATAATTGCGTTTTTTCTATGTTAGCACCTTCGCTAGGGTCGGGCGACAGATAAATCAGCGCCCAATTCAGGCGTT
CATGTCTTTGGGAGGACATC

Downstream 100 bases:

>100_bases
GGCAATGTCCGACGGGGCCGCTCCCGCCTCTCGGGCCGTTGGTGTGGCGCTGATCCTGATCGGGATTGGCGCCACGGTGA
CGAGCATGGGGATCGGGCTG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: ORF7 [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILPVPLVIVNRPGSSGITGATEA
AAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQIGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGR
GGFHHVAGQSFLDRNGLEAQDVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG
FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEARLRLMQEQTQPVIDALRSQG

Sequences:

>Translated_320_residues
MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILPVPLVIVNRPGSSGITGATEA
AAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQIGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGR
GGFHHVAGQSFLDRNGLEAQDVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG
FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEARLRLMQEQTQPVIDALRSQG
>Mature_320_residues
MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILPVPLVIVNRPGSSGITGATEA
AAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQIGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGR
GGFHHVAGQSFLDRNGLEAQDVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG
FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEARLRLMQEQTQPVIDALRSQG

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064
- InterPro:   IPR006311 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33405; Mature: 33405

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILP
CCCHHHHHCCCCCCHHHHCCCHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCC
VPLVIVNRPGSSGITGATEAAAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQ
CCEEEEECCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHH
IGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGRGGFHHVAGQSFLDRNGLEAQ
HCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCHHHHCCCCCCC
DVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG
CCCCCCCCCCHHHEECCCCCEEEEEHHHHCCCCCCEEEEEEECCCHHHHHCCCCCCHHCC
FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEA
CCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH
RLRLMQEQTQPVIDALRSQG
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERRDFMTAGLSASAILAAGPAFAEWAPRRPINAILPYSAGGGTDALARAAAAAAEGILP
CCCHHHHHCCCCCCHHHHCCCHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCC
VPLVIVNRPGSSGITGATEAAAARPDGNTVMVTSAGSFLLTSMLRDTDVTPFDSFEIIAQ
CCEEEEECCCCCCCCCCHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHH
IGNLTPAVIVPANSPFQSVQDLVDAANANPGALRWAHNGRGGFHHVAGQSFLDRNGLEAQ
HCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHCCHHHHCCCCCCC
DVPFQGGGPTRAAVIGEQVDFAFVGIQQAAGFENELRVLALAAPERDAIRDDVPTLPELG
CCCCCCCCCCHHHEECCCCCEEEEEHHHHCCCCCCEEEEEEECCCHHHHHCCCCCCHHCC
FDYVAVSSPIVFFAPIGSDPEVISGMEAALEAITQTEQFADQMRDRGNVPAFLSGADTEA
CCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHH
RLRLMQEQTQPVIDALRSQG
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7851418 [H]