Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053218

Identifier: 89053218

GI number: 89053218

Start: 697298

End: 697774

Strand: Reverse

Name: 89053218

Synonym: Jann_0727

Alternate gene names: NA

Gene position: 697774-697298 (Counterclockwise)

Preceding gene: 89053219

Following gene: 89053217

Centisome position: 16.16

GC content: 65.83

Gene sequence:

>477_bases
ATGTCCGACGGGGCCGCTCCCGCCTCTCGGGCCGTTGGTGTGGCGCTGATCCTGATCGGGATTGGCGCCACGGTGACGAG
CATGGGGATCGGGCTGGACCAGTATGGACGCTGGGGTGCCCGGTTCTTTCCGCTGGCGGGGTCGCTTGCCGTCTTGGCGC
TTGGCATTGCGGAACTGTGGGGTGCGAAGCCCTCGGCATCGACGGCCTTCGACAGGCGGCATATGCCTGCCATCGTGGCG
CTGTTGCTGTTGTCGCTGGCGTATGTCTGGTCGATCTCCGCCGTCGGCTACCTTCTCAGCACCGCCCTTGCCGCGCCCCT
GGCCCTTTTCATCTTCGGGGTGCGTCACCCCATCGGCCTGTGCGCCGCGGCACTCCTGTGCCCGGCCCTCTACCACGCCA
TCTTTTTCGTCGCCTTGGGTGTGTTCCCGCCATTGGGTCGCTGGTTCGACCTGCTTGATGTGATCGGGGGCTATTGA

Upstream 100 bases:

>100_bases
CCCGCCTTCCTCAGCGGGGCCGACACCGAAGCGCGACTGCGCCTGATGCAGGAACAGACCCAACCGGTGATCGACGCCTT
GCGGTCGCAGGGCTAGGGCA

Downstream 100 bases:

>100_bases
GCGATGGATATCTTCCACGGCCTCGCAAACGTGCTTACCGATCCGATCCTGATGGGATGGGTCTTTCTGGCCGCTGTCGT
GGGCATGATCGTCGGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSDGAAPASRAVGVALILIGIGATVTSMGIGLDQYGRWGARFFPLAGSLAVLALGIAELWGAKPSASTAFDRRHMPAIVA
LLLLSLAYVWSISAVGYLLSTALAAPLALFIFGVRHPIGLCAAALLCPALYHAIFFVALGVFPPLGRWFDLLDVIGGY

Sequences:

>Translated_158_residues
MSDGAAPASRAVGVALILIGIGATVTSMGIGLDQYGRWGARFFPLAGSLAVLALGIAELWGAKPSASTAFDRRHMPAIVA
LLLLSLAYVWSISAVGYLLSTALAAPLALFIFGVRHPIGLCAAALLCPALYHAIFFVALGVFPPLGRWFDLLDVIGGY
>Mature_157_residues
SDGAAPASRAVGVALILIGIGATVTSMGIGLDQYGRWGARFFPLAGSLAVLALGIAELWGAKPSASTAFDRRHMPAIVAL
LLLSLAYVWSISAVGYLLSTALAAPLALFIFGVRHPIGLCAAALLCPALYHAIFFVALGVFPPLGRWFDLLDVIGGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16413; Mature: 16281

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDGAAPASRAVGVALILIGIGATVTSMGIGLDQYGRWGARFFPLAGSLAVLALGIAELW
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GAKPSASTAFDRRHMPAIVALLLLSLAYVWSISAVGYLLSTALAAPLALFIFGVRHPIGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CAAALLCPALYHAIFFVALGVFPPLGRWFDLLDVIGGY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDGAAPASRAVGVALILIGIGATVTSMGIGLDQYGRWGARFFPLAGSLAVLALGIAELW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
GAKPSASTAFDRRHMPAIVALLLLSLAYVWSISAVGYLLSTALAAPLALFIFGVRHPIGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CAAALLCPALYHAIFFVALGVFPPLGRWFDLLDVIGGY
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA