| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053217
Identifier: 89053217
GI number: 89053217
Start: 695786
End: 697294
Strand: Reverse
Name: 89053217
Synonym: Jann_0726
Alternate gene names: NA
Gene position: 697294-695786 (Counterclockwise)
Preceding gene: 89053218
Following gene: 89053216
Centisome position: 16.15
GC content: 61.23
Gene sequence:
>1509_bases ATGGATATCTTCCACGGCCTCGCAAACGTGCTTACCGATCCGATCCTGATGGGATGGGTCTTTCTGGCCGCTGTCGTGGG CATGATCGTCGGGGCGATCCCCGGTCTCACAGCTTCTGCGGCCATTGCGATGCTTTTACCGCTCACGTTTTATATGGAGC CCTTGCCCGCCCTCGCATTTCTTTACGTCATCGGCAAATCCGGGCGCTATGGCGGCTCCATCGCCGCGATCCTGTTCAAC ACACCCGGGACGGCAGCCTCGGCCGCGACGCAATTGGATGGCTACCCATTGGCGCGTCAGGGAAAGGCCGGGAAGGCGAT GAAAGTCGCGACCATCTCATCGGTGATCGGTGATTTCACCGGAGAGATCCTGCTGATCGTCGGCGTCGCCTGGATTGCGG CCATCGCCCTGCGACTAGGGCCACCAGAATTGTTCGCGATCTACTTCGCGGCTTTCATCGTCATCGGCTCAGTCATTGGC AAATCCGTCACGCGGGGCCTGGCTTCCGCCGCACTTGGTATTCTCGTCGCGATGATTGGCCTGGACCCGATCAGCTCCAC CGAGCGGTTCACCTTTGGCCAATTCGATCTGACAAATGGCATTTCACTCGTGCCCCTGATGATCGGCATCTTTGTCCTGG GTGAGGTCTTCACCCAGATCGAGGAGCGTGGCGCAAAGACGAAACTGGTTCCGACGAAGGAGGGCGACGCCGCGCGCAAC ACGCTGACATGGGCTGAATTCAAACCCTGCCTCCCCCATGTCGCCCGCTCGTCCTTCATCGGTGCGTTTATCGGCGTGTT GCCGGGTCTCGGGTCGGCCATTGCCGCCTTCGTGGCGTACGGCGAAGGGAAGCGTCGCGCCCGCAACCCGGACGCATGGG GCAAAGGCGCGCTGGAAGGCATCGCCGCGCCCGAAGCGGCCAACAACGCCGTCAGTGGCCCGTCGATGGCGCCGCTGCTG ACCCTCGGCATTCCCGGCTCCACCATCGGCGCCATCCTGATCGGCGTGTTCCTGATCCACGGCATCCAGATCGGCCCGAC GCTGTTTCTGACAAGCCGCGATCTGGTCTTCGCCCTGTTCGCCTGTGGATTGATCGGGATCGTGATGTACGGGGTGATCG GCTATTATGGAGCCGCCTTTGTGGGGCGGTTCATCACCCGCATTCCCACACAGATCCTGTATCCCATCATCTTTCTGACG TCGTTTGTCGCGGCCTACACATCGCGTGGAAACCTCTTTGACGTCTACGTCATGGTCGCCGCTGGCTTCGCCGGTTGGGC GATGCGCAAGTTGCACTTCAACCCGGCGGCCTTCGTGATCTCTTTCGTTCTGGCAGGGGGCGCAGAAGAGGCGTTCCGCC AATCGCTTTTGCTCAGCGACAACGGCCTGATGATCTTTTTCAGCCGCCCCATCGCGCTTGTGTTCCTGCTCATCGGCATC GCCGCAATGATTGCCCGCATCCGCAGCCTCAACAAACAGGCGCGCGCAACGGCCATGGGAGACGCGTGA
Upstream 100 bases:
>100_bases CCCGGCCCTCTACCACGCCATCTTTTTCGTCGCCTTGGGTGTGTTCCCGCCATTGGGTCGCTGGTTCGACCTGCTTGATG TGATCGGGGGCTATTGAGCG
Downstream 100 bases:
>100_bases TGGCGGCACCGCTCAAGGGGATCCGCGTGATCGACTGGACCCATGTCCTCGCGGGGCCCGCCTGTGCCTATTATCTGGGG CAATTGGGGGCGGAGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MDIFHGLANVLTDPILMGWVFLAAVVGMIVGAIPGLTASAAIAMLLPLTFYMEPLPALAFLYVIGKSGRYGGSIAAILFN TPGTAASAATQLDGYPLARQGKAGKAMKVATISSVIGDFTGEILLIVGVAWIAAIALRLGPPELFAIYFAAFIVIGSVIG KSVTRGLASAALGILVAMIGLDPISSTERFTFGQFDLTNGISLVPLMIGIFVLGEVFTQIEERGAKTKLVPTKEGDAARN TLTWAEFKPCLPHVARSSFIGAFIGVLPGLGSAIAAFVAYGEGKRRARNPDAWGKGALEGIAAPEAANNAVSGPSMAPLL TLGIPGSTIGAILIGVFLIHGIQIGPTLFLTSRDLVFALFACGLIGIVMYGVIGYYGAAFVGRFITRIPTQILYPIIFLT SFVAAYTSRGNLFDVYVMVAAGFAGWAMRKLHFNPAAFVISFVLAGGAEEAFRQSLLLSDNGLMIFFSRPIALVFLLIGI AAMIARIRSLNKQARATAMGDA
Sequences:
>Translated_502_residues MDIFHGLANVLTDPILMGWVFLAAVVGMIVGAIPGLTASAAIAMLLPLTFYMEPLPALAFLYVIGKSGRYGGSIAAILFN TPGTAASAATQLDGYPLARQGKAGKAMKVATISSVIGDFTGEILLIVGVAWIAAIALRLGPPELFAIYFAAFIVIGSVIG KSVTRGLASAALGILVAMIGLDPISSTERFTFGQFDLTNGISLVPLMIGIFVLGEVFTQIEERGAKTKLVPTKEGDAARN TLTWAEFKPCLPHVARSSFIGAFIGVLPGLGSAIAAFVAYGEGKRRARNPDAWGKGALEGIAAPEAANNAVSGPSMAPLL TLGIPGSTIGAILIGVFLIHGIQIGPTLFLTSRDLVFALFACGLIGIVMYGVIGYYGAAFVGRFITRIPTQILYPIIFLT SFVAAYTSRGNLFDVYVMVAAGFAGWAMRKLHFNPAAFVISFVLAGGAEEAFRQSLLLSDNGLMIFFSRPIALVFLLIGI AAMIARIRSLNKQARATAMGDA >Mature_502_residues MDIFHGLANVLTDPILMGWVFLAAVVGMIVGAIPGLTASAAIAMLLPLTFYMEPLPALAFLYVIGKSGRYGGSIAAILFN TPGTAASAATQLDGYPLARQGKAGKAMKVATISSVIGDFTGEILLIVGVAWIAAIALRLGPPELFAIYFAAFIVIGSVIG KSVTRGLASAALGILVAMIGLDPISSTERFTFGQFDLTNGISLVPLMIGIFVLGEVFTQIEERGAKTKLVPTKEGDAARN TLTWAEFKPCLPHVARSSFIGAFIGVLPGLGSAIAAFVAYGEGKRRARNPDAWGKGALEGIAAPEAANNAVSGPSMAPLL TLGIPGSTIGAILIGVFLIHGIQIGPTLFLTSRDLVFALFACGLIGIVMYGVIGYYGAAFVGRFITRIPTQILYPIIFLT SFVAAYTSRGNLFDVYVMVAAGFAGWAMRKLHFNPAAFVISFVLAGGAEEAFRQSLLLSDNGLMIFFSRPIALVFLLIGI AAMIARIRSLNKQARATAMGDA
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52565; Mature: 52565
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIFHGLANVLTDPILMGWVFLAAVVGMIVGAIPGLTASAAIAMLLPLTFYMEPLPALAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYVIGKSGRYGGSIAAILFNTPGTAASAATQLDGYPLARQGKAGKAMKVATISSVIGDFT HHHHCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GEILLIVGVAWIAAIALRLGPPELFAIYFAAFIVIGSVIGKSVTRGLASAALGILVAMIG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDPISSTERFTFGQFDLTNGISLVPLMIGIFVLGEVFTQIEERGAKTKLVPTKEGDAARN CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHC TLTWAEFKPCLPHVARSSFIGAFIGVLPGLGSAIAAFVAYGEGKRRARNPDAWGKGALEG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH IAAPEAANNAVSGPSMAPLLTLGIPGSTIGAILIGVFLIHGIQIGPTLFLTSRDLVFALF CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH ACGLIGIVMYGVIGYYGAAFVGRFITRIPTQILYPIIFLTSFVAAYTSRGNLFDVYVMVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AGFAGWAMRKLHFNPAAFVISFVLAGGAEEAFRQSLLLSDNGLMIFFSRPIALVFLLIGI HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH AAMIARIRSLNKQARATAMGDA HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDIFHGLANVLTDPILMGWVFLAAVVGMIVGAIPGLTASAAIAMLLPLTFYMEPLPALAF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYVIGKSGRYGGSIAAILFNTPGTAASAATQLDGYPLARQGKAGKAMKVATISSVIGDFT HHHHCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GEILLIVGVAWIAAIALRLGPPELFAIYFAAFIVIGSVIGKSVTRGLASAALGILVAMIG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDPISSTERFTFGQFDLTNGISLVPLMIGIFVLGEVFTQIEERGAKTKLVPTKEGDAARN CCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHC TLTWAEFKPCLPHVARSSFIGAFIGVLPGLGSAIAAFVAYGEGKRRARNPDAWGKGALEG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH IAAPEAANNAVSGPSMAPLLTLGIPGSTIGAILIGVFLIHGIQIGPTLFLTSRDLVFALF CCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH ACGLIGIVMYGVIGYYGAAFVGRFITRIPTQILYPIIFLTSFVAAYTSRGNLFDVYVMVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AGFAGWAMRKLHFNPAAFVISFVLAGGAEEAFRQSLLLSDNGLMIFFSRPIALVFLLIGI HHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH AAMIARIRSLNKQARATAMGDA HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]