Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053192

Identifier: 89053192

GI number: 89053192

Start: 673883

End: 674359

Strand: Reverse

Name: 89053192

Synonym: Jann_0701

Alternate gene names: NA

Gene position: 674359-673883 (Counterclockwise)

Preceding gene: 89053201

Following gene: 89053187

Centisome position: 15.62

GC content: 62.47

Gene sequence:

>477_bases
ATGAGTTCAACAACGTTCGAAGACCGACTGTCCCGTATCGCAGGCCATGCACGCCCAATGCCGCCGCCCGTTGCCACGAT
CCTTGAACGCGACACGCCCACCCCCCGTGCTCGGATCGGTGCGGTTCGGATGTTGATCATGCTGCCCCTTGCCATGGCCA
TGGGCGCGGCGGCTGTGCTGCTTGGCGGCATCGTGCAGGTGGCGATCATTGATGGCGGCCTGACCGCCGATACGGCCATT
CCGCCGCAGCTGGGGTTCATCGCCTTTGGTATCGCCTTCGTGCTCAGCTTCCTGATCGACAGGCTGGTCGGGGGTGGCGC
GCTTGCCCCCTTCGCCGTGACCGTTGGCTTTGTCGCCATGATCTGGGGAGAGGCGCAGCTGGCCGAGATGTATCCCGAAC
TTTGGCTGGAGATCTATCAGGCGAAGTATCTGACCCCGGTTCTGGATCTGCTGGCCGAGAACGGAATCGAATTCTAG

Upstream 100 bases:

>100_bases
TCCAGCCAATCGCCCGATCATTGCCGCCCGCCCATCGCACTGCGGCCACAATCCGCCCCGATTATTTACCAAACACCGAC
AAATCCGGGATCTGAGACCC

Downstream 100 bases:

>100_bases
GCGTCAGCCAACGGGCCCATCCTTGTCGTAGGCCTGAATGATCTTGGCGACCATGTGGTGACGCACGACATCCTTGGCGG
TGAAATAGTTGAAGCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVLLGGIVQVAIIDGGLTADTAI
PPQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAMIWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF

Sequences:

>Translated_158_residues
MSSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVLLGGIVQVAIIDGGLTADTAI
PPQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAMIWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF
>Mature_157_residues
SSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVLLGGIVQVAIIDGGLTADTAIP
PQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAMIWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16824; Mature: 16693

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVL
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGGIVQVAIIDGGLTADTAIPPQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAM
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSTTFEDRLSRIAGHARPMPPPVATILERDTPTPRARIGAVRMLIMLPLAMAMGAAAVL
CCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LGGIVQVAIIDGGLTADTAIPPQLGFIAFGIAFVLSFLIDRLVGGGALAPFAVTVGFVAM
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IWGEAQLAEMYPELWLEIYQAKYLTPVLDLLAENGIEF
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA