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The map label for this gene is yqfA [C]

Identifier: 89053038

GI number: 89053038

Start: 536100

End: 536759

Strand: Reverse

Name: yqfA [C]

Synonym: Jann_0547

Alternate gene names: 89053038

Gene position: 536759-536100 (Counterclockwise)

Preceding gene: 89053040

Following gene: 89053037

Centisome position: 12.43

GC content: 59.7

Gene sequence:

>660_bases
ATGGCACATCTTCGATCCAATCGAGCGTACAGTCGGGCCGAGTATCTCTCGGACGCGGTCGTGCACGGGCTTGGCATCGG
GGGTGCGTTGATCGCCGGGCCCGTTTTGATCACCCTCGCAGCCGTCTGGGTCGGCGACCCGACCCTCATCGGCGCGCTGG
CGATCTACACGATCACGCTGCTGGCGATGTGGGTGTGTTCCGCCCTCTACAACCTTGTCCAAAGCGAGGATCTCACCCCT
CGCTTCCGGCGCTTTGACCAATCGGCGATCTATTTCAAGATAGCCGGCACCTACACGCCCTTTATCGCGCTGGCCTCGGG
ATCAATGGGGTTTTTCGCAGGCATCTGGACCGTTGCGCTGGCGGGGGCATCGGTCATCCTGTTTTCCAAACGCTCCTACA
TCTGGCTGGCGATTGCCCTCTATCTTGGCCTTGGATGGGCAGGCACGGTCGCTGGTGGGCCACTTTTGTCAGGTATCACG
CCGCTGGCCATGTCCCTTTTGATCGTAGGGGGGCTGACCTACTCGTTTGGGATCATTTTCCTGATGTGGAGCAAGCTGCC
CTTCCACAACACGATCTGGCATATCTGCGTACTGGCCGGGACATCCGTGTGCTACGCCGCAATCATTGCAGAATTGCTGC
ACAACGCCCCCCACGTGTAA

Upstream 100 bases:

>100_bases
CGCCCTCACAAGACGCAAACGCAACAGATCACGAAGTGATAACAGTTTGTTTTCTATAATTTCTGGGTTTGTTAACCTTT
TTGCGCCTACACTCAGTATC

Downstream 100 bases:

>100_bases
CGCGGCGTCGTTAGGACCTGCCGCGTCGATTTTGACCTATGTTCCGATGCCAGTTGGGGCTATCCCTTTGCCAAGAATGC
TTGCTTGGGTCCGCCCAAAT

Product: Hly-III-like proteins

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAHLRSNRAYSRAEYLSDAVVHGLGIGGALIAGPVLITLAAVWVGDPTLIGALAIYTITLLAMWVCSALYNLVQSEDLTP
RFRRFDQSAIYFKIAGTYTPFIALASGSMGFFAGIWTVALAGASVILFSKRSYIWLAIALYLGLGWAGTVAGGPLLSGIT
PLAMSLLIVGGLTYSFGIIFLMWSKLPFHNTIWHICVLAGTSVCYAAIIAELLHNAPHV

Sequences:

>Translated_219_residues
MAHLRSNRAYSRAEYLSDAVVHGLGIGGALIAGPVLITLAAVWVGDPTLIGALAIYTITLLAMWVCSALYNLVQSEDLTP
RFRRFDQSAIYFKIAGTYTPFIALASGSMGFFAGIWTVALAGASVILFSKRSYIWLAIALYLGLGWAGTVAGGPLLSGIT
PLAMSLLIVGGLTYSFGIIFLMWSKLPFHNTIWHICVLAGTSVCYAAIIAELLHNAPHV
>Mature_218_residues
AHLRSNRAYSRAEYLSDAVVHGLGIGGALIAGPVLITLAAVWVGDPTLIGALAIYTITLLAMWVCSALYNLVQSEDLTPR
FRRFDQSAIYFKIAGTYTPFIALASGSMGFFAGIWTVALAGASVILFSKRSYIWLAIALYLGLGWAGTVAGGPLLSGITP
LAMSLLIVGGLTYSFGIIFLMWSKLPFHNTIWHICVLAGTSVCYAAIIAELLHNAPHV

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=202, Percent_Identity=31.1881188118812, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23396; Mature: 23265

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHLRSNRAYSRAEYLSDAVVHGLGIGGALIAGPVLITLAAVWVGDPTLIGALAIYTITL
CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LAMWVCSALYNLVQSEDLTPRFRRFDQSAIYFKIAGTYTPFIALASGSMGFFAGIWTVAL
HHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCCCHHHEECCCCHHHHHHHHHHH
AGASVILFSKRSYIWLAIALYLGLGWAGTVAGGPLLSGITPLAMSLLIVGGLTYSFGIIF
HCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMWSKLPFHNTIWHICVLAGTSVCYAAIIAELLHNAPHV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AHLRSNRAYSRAEYLSDAVVHGLGIGGALIAGPVLITLAAVWVGDPTLIGALAIYTITL
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LAMWVCSALYNLVQSEDLTPRFRRFDQSAIYFKIAGTYTPFIALASGSMGFFAGIWTVAL
HHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCCCHHHEECCCCHHHHHHHHHHH
AGASVILFSKRSYIWLAIALYLGLGWAGTVAGGPLLSGITPLAMSLLIVGGLTYSFGIIF
HCCCEEEEECCCHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMWSKLPFHNTIWHICVLAGTSVCYAAIIAELLHNAPHV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]