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The map label for this gene is etfB [H]

Identifier: 89053037

GI number: 89053037

Start: 535220

End: 535981

Strand: Reverse

Name: etfB [H]

Synonym: Jann_0546

Alternate gene names: 89053037

Gene position: 535981-535220 (Counterclockwise)

Preceding gene: 89053038

Following gene: 89053036

Centisome position: 12.41

GC content: 60.5

Gene sequence:

>762_bases
ATGAAGGTCCTAGTGCCCGTAAAACGCGTGATCGACTATAACGTGAAGGTCCGCGTGAAGGCGGACGGGAGCGGCGTCGA
TCTTGCCAACGTGAAGATGTCGATGAACCCTTTCGATGAGATTGCTGTCGAAGAGGCAATCCGCCTGAAAGAGGCCGGCA
AGGCCGAAGAGGTGATCGCTGTCTCCATCGGCGTGAAGCAGAACCAGGAAACCCTGCGCACGGCGCTTGCCATGGGGGCC
GACCGCGCGATCCTGGTGATCGCCGCCGAGGACGTCCACCAGGATATCGAGCCGCTCGCGGTCGCCAAGATCCTCAAAGC
CGTCGTCGATGAAGAGAAGCCCGGCCTTGTGCTGGCGGGCAAGCAGGCCATCGACAACGACATGAACGCGACCGGTCAGA
TGCTGGCCGCACTTTTGGGCTGGTCCCAGGGCACATTCGCATCTGAGGTCGATATCGACGGTGACACTGCGAAGATCACG
CGCGAAGTGGACGGGGGTCTGCAGACCATCGAGGTGAAGATGCCCGCCATCGTCACCGTTGACCTGCGCCTGAATGAACC
GCGCTACGCAAGCTTGCCCAACATCATGAAGGCCAAGAAGAAACCGTTGGACGAGAAAACCGCCGCCGATTACGGCGTCG
ACGTCACGCCGCGCCTGGAAATCGTGACAACGTCCGAGCCCGAAGCCCGTGCCGCTGGCGTCAAGGTGGCCTCGGTCGAT
GAACTTCTGACGAAACTCAAAGATGAAGCGGGGGTCCTTTGA

Upstream 100 bases:

>100_bases
TGCCGCGTCGATTTTGACCTATGTTCCGATGCCAGTTGGGGCTATCCCTTTGCCAAGAATGCTTGCTTGGGTCCGCCCAA
ATTTGACAGAGGAGAACGCC

Downstream 100 bases:

>100_bases
AATGGCTGTTCTTCTCCTTGCCGAAGTGAATGCCGGTGAACTGGCGATGGATGCGACCGCGAAGGCGGTGACCGCCGCCG
CGCAGCTGGGGGATGTCACG

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MKVLVPVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEAGKAEEVIAVSIGVKQNQETLRTALAMGA
DRAILVIAAEDVHQDIEPLAVAKILKAVVDEEKPGLVLAGKQAIDNDMNATGQMLAALLGWSQGTFASEVDIDGDTAKIT
REVDGGLQTIEVKMPAIVTVDLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVTPRLEIVTTSEPEARAAGVKVASVD
ELLTKLKDEAGVL

Sequences:

>Translated_253_residues
MKVLVPVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEAGKAEEVIAVSIGVKQNQETLRTALAMGA
DRAILVIAAEDVHQDIEPLAVAKILKAVVDEEKPGLVLAGKQAIDNDMNATGQMLAALLGWSQGTFASEVDIDGDTAKIT
REVDGGLQTIEVKMPAIVTVDLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVTPRLEIVTTSEPEARAAGVKVASVD
ELLTKLKDEAGVL
>Mature_253_residues
MKVLVPVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEAGKAEEVIAVSIGVKQNQETLRTALAMGA
DRAILVIAAEDVHQDIEPLAVAKILKAVVDEEKPGLVLAGKQAIDNDMNATGQMLAALLGWSQGTFASEVDIDGDTAKIT
REVDGGLQTIEVKMPAIVTVDLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVTPRLEIVTTSEPEARAAGVKVASVD
ELLTKLKDEAGVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=248, Percent_Identity=57.6612903225806, Blast_Score=279, Evalue=2e-75,
Organism=Homo sapiens, GI62420877, Length=233, Percent_Identity=56.2231759656652, Blast_Score=256, Evalue=1e-68,
Organism=Escherichia coli, GI87081682, Length=217, Percent_Identity=28.110599078341, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=52.5691699604743, Blast_Score=243, Evalue=8e-65,
Organism=Saccharomyces cerevisiae, GI6321646, Length=253, Percent_Identity=49.802371541502, Blast_Score=241, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24651147, Length=247, Percent_Identity=57.8947368421053, Blast_Score=259, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24651145, Length=247, Percent_Identity=57.8947368421053, Blast_Score=259, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27107; Mature: 27107

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVPVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEAGKAEEVIA
CCEEECHHHHHCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEE
VSIGVKQNQETLRTALAMGADRAILVIAAEDVHQDIEPLAVAKILKAVVDEEKPGLVLAG
EEECCCCCHHHHHHHHHCCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHCCCCCCEEEEC
KQAIDNDMNATGQMLAALLGWSQGTFASEVDIDGDTAKITREVDGGLQTIEVKMPAIVTV
CHHHCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHEEEEHHCCCEEEEEEECCEEEEE
DLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVTPRLEIVTTSEPEARAAGVKVASVD
EEEECCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHCEEEECHH
ELLTKLKDEAGVL
HHHHHHHHHHCCC
>Mature Secondary Structure
MKVLVPVKRVIDYNVKVRVKADGSGVDLANVKMSMNPFDEIAVEEAIRLKEAGKAEEVIA
CCEEECHHHHHCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEE
VSIGVKQNQETLRTALAMGADRAILVIAAEDVHQDIEPLAVAKILKAVVDEEKPGLVLAG
EEECCCCCHHHHHHHHHCCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHCCCCCCEEEEC
KQAIDNDMNATGQMLAALLGWSQGTFASEVDIDGDTAKITREVDGGLQTIEVKMPAIVTV
CHHHCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCHHEEEEHHCCCEEEEEEECCEEEEE
DLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVTPRLEIVTTSEPEARAAGVKVASVD
EEEECCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCEEEEECCCCCHHHHCEEEECHH
ELLTKLKDEAGVL
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8376381; 1576992; 10026281 [H]