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The map label for this gene is 89053040

Identifier: 89053040

GI number: 89053040

Start: 537858

End: 538430

Strand: Reverse

Name: 89053040

Synonym: Jann_0549

Alternate gene names: NA

Gene position: 538430-537858 (Counterclockwise)

Preceding gene: 89053041

Following gene: 89053038

Centisome position: 12.47

GC content: 60.56

Gene sequence:

>573_bases
ATGGTTGTTCTGAACAAAATCTACACGCGCACGGGCGACGCCGGTGAAACGGCGTTGGGTGATGGCAGCCGCGTGGCCAA
ATTTTCACAGCGCGTGACTGCTTACGGCACAGTGGATGAGTTGAACGCAACCCTGGGGGTCGCACGTCTCCATGCCGATG
GTCTGATGGCCGAGCGCATCGCGATGATCCAAAATGATCTGTTCGATCTGGGCGCGGATCTGTGTACGCCCAACATGGAG
ATGGACGCCGATCGCGAGTACCCGCCGCTCCGGATGGCCGACGCCCAGGTGGCGCGTCTGGAAGCCGAAATCGACGAGAT
GAACCCAAATCTGGAGCCGTTGAGATCTTTCATCCTCCCCGGCGGCTCGCCCCTGGCCAGCCATCTGCACATTTGCCGGA
CGGTCTGCCGGCGGGCAGAGCGGTTGTCGGTAGAATTGGGCGGCGTCGAGTCCGTCAATCCAGCAGGCGTCAAATATCTC
AACCGCCTCTCCGACTGGTTTTTCGTCGCAGGCCGGATCGCCAACAACAACGGCAAAGACGACATCTTGTGGGTTCCCGG
AGCGAACCGCTGA

Upstream 100 bases:

>100_bases
TCCAACAAACTGATGCAATGGCGCTTGGGCGCGCAATTTCTGGCCATCCTCTTGTTGCTGGCCTTCGTCTATTTCCGTCG
ACAATCCGGGGGCTGAGCAC

Downstream 100 bases:

>100_bases
AAGCGGCGGACGCACCGCGTGTGGCGACGGGAAGAGCGAACCTCTAAAGTTGGTGAACGTCATGGCAACCAGATAGGCAA
CGCGCGAACCGGTGATGGAC

Product: ATP:cob(I)alamin adenosyltransferase

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MVVLNKIYTRTGDAGETALGDGSRVAKFSQRVTAYGTVDELNATLGVARLHADGLMAERIAMIQNDLFDLGADLCTPNME
MDADREYPPLRMADAQVARLEAEIDEMNPNLEPLRSFILPGGSPLASHLHICRTVCRRAERLSVELGGVESVNPAGVKYL
NRLSDWFFVAGRIANNNGKDDILWVPGANR

Sequences:

>Translated_190_residues
MVVLNKIYTRTGDAGETALGDGSRVAKFSQRVTAYGTVDELNATLGVARLHADGLMAERIAMIQNDLFDLGADLCTPNME
MDADREYPPLRMADAQVARLEAEIDEMNPNLEPLRSFILPGGSPLASHLHICRTVCRRAERLSVELGGVESVNPAGVKYL
NRLSDWFFVAGRIANNNGKDDILWVPGANR
>Mature_190_residues
MVVLNKIYTRTGDAGETALGDGSRVAKFSQRVTAYGTVDELNATLGVARLHADGLMAERIAMIQNDLFDLGADLCTPNME
MDADREYPPLRMADAQVARLEAEIDEMNPNLEPLRSFILPGGSPLASHLHICRTVCRRAERLSVELGGVESVNPAGVKYL
NRLSDWFFVAGRIANNNGKDDILWVPGANR

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=175, Percent_Identity=38.8571428571429, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115534154, Length=178, Percent_Identity=38.2022471910112, Blast_Score=100, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 20799; Mature: 20799

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVLNKIYTRTGDAGETALGDGSRVAKFSQRVTAYGTVDELNATLGVARLHADGLMAERI
CEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AMIQNDLFDLGADLCTPNMEMDADREYPPLRMADAQVARLEAEIDEMNPNLEPLRSFILP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCC
GGSPLASHLHICRTVCRRAERLSVELGGVESVNPAGVKYLNRLSDWFFVAGRIANNNGKD
CCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCC
DILWVPGANR
CEEECCCCCC
>Mature Secondary Structure
MVVLNKIYTRTGDAGETALGDGSRVAKFSQRVTAYGTVDELNATLGVARLHADGLMAERI
CEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AMIQNDLFDLGADLCTPNMEMDADREYPPLRMADAQVARLEAEIDEMNPNLEPLRSFILP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCC
GGSPLASHLHICRTVCRRAERLSVELGGVESVNPAGVKYLNRLSDWFFVAGRIANNNGKD
CCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCCC
DILWVPGANR
CEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]