| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yieH [H]
Identifier: 89052933
GI number: 89052933
Start: 445582
End: 446238
Strand: Direct
Name: yieH [H]
Synonym: Jann_0442
Alternate gene names: 89052933
Gene position: 445582-446238 (Clockwise)
Preceding gene: 89052932
Following gene: 89052934
Centisome position: 10.32
GC content: 60.27
Gene sequence:
>657_bases ATGATACCTGACCTTGTCATCTTCGATTGCGATGGAGTGCTGGTGGACAGCGAGCCCTTGTCCAATCAGGTTACCGTCGA TGCGCTGGCAGACATGGGTATTCACATGAGCCTGGACGAGATTATGGCGATGTTCGTTGGCAAGAGCATGGCTCAGGTTG CGGCCGGTGTGCGTGCCATGGGTGCACCACTGCCCGGCTCGGATGCGGAGTGGATCGACACCCTATATACCGAGACCTAC GCGCGGCTGCGCCAAGGGGTGGATCCCATCCCCGGTGTCGTGGGCGTGCTTGACGCGTTGGACACCGCAGGCGTGCCCTA TTGCGTCGCGTCCAACGGGTCCGATGAGAAGATGGACATCACCCTTGGCGGCACCGGCATGGCGGAGCGTTTCAAGGGCA AACGGTTTTCCGCCCACACATTGGGTGTGTCAAAACCGGACCCGGAGTTGTTCTTCATCGCGGCGAAATACATGAGCGTC GTGCCGTCGCGCGCGGTGGTGATCGAGGACAGCCCATCGGGAGCGTTAGGCGCACAGCGGGCTGGGATGCGGTGCTTTGG CTATGCACCAGAGGGAGGGGACGCTTTGGAAGAGGTGGGCGCACACGTCTTTCAATCCATGAACGATCTACCAGCCCTGC TCGGGATTAAGGACTAA
Upstream 100 bases:
>100_bases TGGTGTGGGAAGAAAGCGCCCCGCCCATTATTCCCGCGCCGTTTCAGATGCTTGACCAACGCGGCTACGGCCAAACCACC ATAACCATCCTGAGGTTCCC
Downstream 100 bases:
>100_bases TCCACAAGATGTTGGCGTCCCGGGTCTTGTTTACGGAATCTCAATATGGGACCATCTAGATAACAACGAGCATTTAGATA AAAATCAACAGGCTGCCCCA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MIPDLVIFDCDGVLVDSEPLSNQVTVDALADMGIHMSLDEIMAMFVGKSMAQVAAGVRAMGAPLPGSDAEWIDTLYTETY ARLRQGVDPIPGVVGVLDALDTAGVPYCVASNGSDEKMDITLGGTGMAERFKGKRFSAHTLGVSKPDPELFFIAAKYMSV VPSRAVVIEDSPSGALGAQRAGMRCFGYAPEGGDALEEVGAHVFQSMNDLPALLGIKD
Sequences:
>Translated_218_residues MIPDLVIFDCDGVLVDSEPLSNQVTVDALADMGIHMSLDEIMAMFVGKSMAQVAAGVRAMGAPLPGSDAEWIDTLYTETY ARLRQGVDPIPGVVGVLDALDTAGVPYCVASNGSDEKMDITLGGTGMAERFKGKRFSAHTLGVSKPDPELFFIAAKYMSV VPSRAVVIEDSPSGALGAQRAGMRCFGYAPEGGDALEEVGAHVFQSMNDLPALLGIKD >Mature_218_residues MIPDLVIFDCDGVLVDSEPLSNQVTVDALADMGIHMSLDEIMAMFVGKSMAQVAAGVRAMGAPLPGSDAEWIDTLYTETY ARLRQGVDPIPGVVGVLDALDTAGVPYCVASNGSDEKMDITLGGTGMAERFKGKRFSAHTLGVSKPDPELFFIAAKYMSV VPSRAVVIEDSPSGALGAQRAGMRCFGYAPEGGDALEEVGAHVFQSMNDLPALLGIKD
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=211, Percent_Identity=31.7535545023697, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082080, Length=196, Percent_Identity=27.0408163265306, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 22916; Mature: 22916
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPDLVIFDCDGVLVDSEPLSNQVTVDALADMGIHMSLDEIMAMFVGKSMAQVAAGVRAM CCCCEEEEECCCEEECCCCCCCCEEHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH GAPLPGSDAEWIDTLYTETYARLRQGVDPIPGVVGVLDALDTAGVPYCVASNGSDEKMDI CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEE TLGGTGMAERFKGKRFSAHTLGVSKPDPELFFIAAKYMSVVPSRAVVIEDSPSGALGAQR EECCCCHHHHHCCCCCEEEECCCCCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCHHH AGMRCFGYAPEGGDALEEVGAHVFQSMNDLPALLGIKD CCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MIPDLVIFDCDGVLVDSEPLSNQVTVDALADMGIHMSLDEIMAMFVGKSMAQVAAGVRAM CCCCEEEEECCCEEECCCCCCCCEEHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHH GAPLPGSDAEWIDTLYTETYARLRQGVDPIPGVVGVLDALDTAGVPYCVASNGSDEKMDI CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEE TLGGTGMAERFKGKRFSAHTLGVSKPDPELFFIAAKYMSVVPSRAVVIEDSPSGALGAQR EECCCCHHHHHCCCCCEEEECCCCCCCCCEEEHHHHHHHHCCCCEEEEECCCCCCCCHHH AGMRCFGYAPEGGDALEEVGAHVFQSMNDLPALLGIKD CCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]