| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052794
Identifier: 89052794
GI number: 89052794
Start: 309907
End: 310644
Strand: Direct
Name: 89052794
Synonym: Jann_0303
Alternate gene names: NA
Gene position: 309907-310644 (Clockwise)
Preceding gene: 89052790
Following gene: 89052795
Centisome position: 7.18
GC content: 63.69
Gene sequence:
>738_bases ATGATGTCAGACAAACCCTCCGATACGGATGATGGCTTGGCCTCAACAAGCCTGAGCGTCGCCGTCCAGTTCGTTGGGGC GGGCTGTGTGGGCGCCGCTGCCGTTGCGACGTTGGCCTGGGCGCTGGTTGGCAATGCGCTTGCCATTGGCATTGCGGTAA TTTTCTTCGCGGCTGTCATGGCGATCGCGCTTGTCGGTCTCGTGGCCAGTTTTCCGCATCGGGTCATCGGCTTGTGTAAT CTGGCCACAATCGCAAGGTTGGCACTGGTGTCCGTCTTGATTGCGGCACTGGTGGCGCCCGCCGCATCTGCATGGGCCGT GTTTGGGCTGGCGGTTCTGGCCTTCGCGTTGGATGGGCTGGACGGGTATCTGGCCCGGAGAGAGGGGCGCGCCTCCGCAT TTGGCGCGCGCTTCGACATGGAGGTTGATTCCCTTCTGGCCCTCACATTGGCCCTGCTGACCTGGCAAAGTGGCGCGGTT GGGGCCTATGTCCTGATCCTAGGCCTGCCGCGTTATGCGTTCTGGGTCGCTCAGGTTCCATTCCCGTGGCTGGGCCACGA CCTGCCCGAGCGCTTCAGCCGCAAGGTTGCTTGCGTTGTGCAGATCGCCGCGCTGATCCTGGCGCTGTTCCCGCCGGCGC CGTCGATCTTGGTGGGCAGCATCGCGGGGCTGGCCGCAATCGCGCTGGTCTGGTCATTCTCACTGGATGCTCGAACCCTC TGGAGGGCGCAGACGTGA
Upstream 100 bases:
>100_bases CCTCGCTATCGGTTAACGGTTGCCATCCCCGGCTATCAGGCCACTTTGGGTGCAATCCCCTCGCTTAGACAAGGTCAGAA TTGGCAAGGCCCTCCTCACG
Downstream 100 bases:
>100_bases GACTCCTTCGGCTCGCGATTGCGGCGCTGATCCTGTTCCTGGTGCTCATCCAACCGAACCATCCCGCCGCCCTCGCGTGG GGCGCGCTTGGTGTTTTTCC
Product: CDP-alcohol phosphatidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVMAIALVGLVASFPHRVIGLCN LATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGLDGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAV GAYVLILGLPRYAFWVAQVPFPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL WRAQT
Sequences:
>Translated_245_residues MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVMAIALVGLVASFPHRVIGLCN LATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGLDGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAV GAYVLILGLPRYAFWVAQVPFPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL WRAQT >Mature_245_residues MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVMAIALVGLVASFPHRVIGLCN LATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGLDGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAV GAYVLILGLPRYAFWVAQVPFPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL WRAQT
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25332; Mature: 25332
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVM CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIALVGLVASFPHRVIGLCNLATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCH DGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAVGAYVLILGLPRYAFWVAQVP HHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCC FPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH WRAQT HCCCC >Mature Secondary Structure MMSDKPSDTDDGLASTSLSVAVQFVGAGCVGAAAVATLAWALVGNALAIGIAVIFFAAVM CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIALVGLVASFPHRVIGLCNLATIARLALVSVLIAALVAPAASAWAVFGLAVLAFALDGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCH DGYLARREGRASAFGARFDMEVDSLLALTLALLTWQSGAVGAYVLILGLPRYAFWVAQVP HHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHCCC FPWLGHDLPERFSRKVACVVQIAALILALFPPAPSILVGSIAGLAAIALVWSFSLDARTL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH WRAQT HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA