Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052713

Identifier: 89052713

GI number: 89052713

Start: 217808

End: 219241

Strand: Direct

Name: 89052713

Synonym: Jann_0222

Alternate gene names: NA

Gene position: 217808-219241 (Clockwise)

Preceding gene: 89052712

Following gene: 89052720

Centisome position: 5.04

GC content: 58.02

Gene sequence:

>1434_bases
ATGGCCGGTCGTTTCGATGCTTTCGTGTTGTTCGCCGAGATGCGGACGGGCTCCAACTACCTGGAAGACAGCCTCAACAC
CTTCGCGGATATCAACTGTCTGGGGGAGGTCTTTAATCCCACCTTCATTGGTCATGACAACAATTTTGAGATGCTCGGCT
ATGACATGGATCGGCGGGAACACGATCCCTTGGGTCTGTTGGACGCCATTATTGACACGGTCGACGGGCTGCCGGGGTTT
CGCCTGTTCCACGACCATGACACCCGCGTGGTGGATCGCGTTCTGCCGGACCCGCGCATCGCCAAAGTGATCCTGACGCG
CAACCCGTTGGACAGCTACGTCAGCCGCAAGATCGCCACGGCCACCGGGCAGTGGAAGCTGACCGATATGAAACACGCCA
AGACGGCGCAGATCAGGTTTGATGCGGATGAGTTCGGGGCGCTGTTGGATGCCGTGCTGCCCTTTCAGGAATATGTGCGG
CAGGGTCTGCTAAAATCCGGGCAAGTGGCGTTTCAGGTGCGGTATGAGGATATCAACGATCCTGAGATGTTGAATGGTTT
GGCGGCTTTCCTTGGCTCGGATGAACGGGTGGAGAGGGCGTCGAAGACGCTGAAAAGACAAAACCCCGCGCCCCTGCGGG
ACAAGGTTGAAAACTATGAGGAGATGGTCGCAGCGCTGAGCGATCTGGATCGCTTCGGCTTGGATAAGCTGCCTGAGTTA
GAGCCTGATCGCGGCGCGCAGGTGCCCAACTTCGTGGCGCATCCGACGCTGGGCCTTCTGTTCTGCCCGATCAAGGGCGC
GCCGGAGAAGTCTGTGCTGAACTGGATGGGCGCGCTTGGGGATGTGGGCAAAGATGCCCTGATCCGCAAGATGACCCAGA
AGCAGCTCCGTCAGTGGATGAAGGACAATCCCGGTTTTCGCAGCTTCACCGTTCTGCGCCATCCCGTCGTTCGTGCCTAT
ACCGTGTTCAACCGCTTCATCCTGCCCGATGACCGCCCCGCCTATGCTGATCCGCGTAAGACTTTGCGGCAACGCTACAA
GGTGCCGATCCCGGAAAACGCTCCGGGAGACGGATGGACGGAGGCTGAGCAAAAGGCCGCGTTCCAAGGGTTCATCTTTT
TTTTGAAGGGCAATCTTGCGGGACAGACATCGGTGCGGGTGGATCAGGCCTGGGCGACGCAAACGGCGATTTTACAGGGC
ACTTCCTCGGTTATGGTGCCGCAGGCGGTCATCCACGAAGATCATATGACAGAGGCGCTGCCAGCCCTTGCGCACCAAGT
GGGGGCTGAAGATGTGCCGCAGGTCGTGGAGGAGGCGATGCCTGGTCTGCATAAGCTGAAATCCATCTATGATGGAAAGA
TTGAGCAGGCTCTGATCGACACCTATCGGCGCGATTATGTCGGGTTTGGTTTTCCGCGTTGGAACAAACGTTAG

Upstream 100 bases:

>100_bases
CCAGGGAATGAACCCCTTTGCCGTGGGTGATTTCCCGCAAGAAGGCGTCGCGCCGCTTCCTGCCGGTGCCGACAACCGCC
CATATCTGGTGAGATAGCCC

Downstream 100 bases:

>100_bases
GCGGCTTTCGTCGCCTCGCCCTCAGTCAGCAGAGTGTAAAGCGTGGAAGCATCGCTGTTGGCGCGTAATTTCGTGCAAAG
CGCCGGATCGCGCAACGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MAGRFDAFVLFAEMRTGSNYLEDSLNTFADINCLGEVFNPTFIGHDNNFEMLGYDMDRREHDPLGLLDAIIDTVDGLPGF
RLFHDHDTRVVDRVLPDPRIAKVILTRNPLDSYVSRKIATATGQWKLTDMKHAKTAQIRFDADEFGALLDAVLPFQEYVR
QGLLKSGQVAFQVRYEDINDPEMLNGLAAFLGSDERVERASKTLKRQNPAPLRDKVENYEEMVAALSDLDRFGLDKLPEL
EPDRGAQVPNFVAHPTLGLLFCPIKGAPEKSVLNWMGALGDVGKDALIRKMTQKQLRQWMKDNPGFRSFTVLRHPVVRAY
TVFNRFILPDDRPAYADPRKTLRQRYKVPIPENAPGDGWTEAEQKAAFQGFIFFLKGNLAGQTSVRVDQAWATQTAILQG
TSSVMVPQAVIHEDHMTEALPALAHQVGAEDVPQVVEEAMPGLHKLKSIYDGKIEQALIDTYRRDYVGFGFPRWNKR

Sequences:

>Translated_477_residues
MAGRFDAFVLFAEMRTGSNYLEDSLNTFADINCLGEVFNPTFIGHDNNFEMLGYDMDRREHDPLGLLDAIIDTVDGLPGF
RLFHDHDTRVVDRVLPDPRIAKVILTRNPLDSYVSRKIATATGQWKLTDMKHAKTAQIRFDADEFGALLDAVLPFQEYVR
QGLLKSGQVAFQVRYEDINDPEMLNGLAAFLGSDERVERASKTLKRQNPAPLRDKVENYEEMVAALSDLDRFGLDKLPEL
EPDRGAQVPNFVAHPTLGLLFCPIKGAPEKSVLNWMGALGDVGKDALIRKMTQKQLRQWMKDNPGFRSFTVLRHPVVRAY
TVFNRFILPDDRPAYADPRKTLRQRYKVPIPENAPGDGWTEAEQKAAFQGFIFFLKGNLAGQTSVRVDQAWATQTAILQG
TSSVMVPQAVIHEDHMTEALPALAHQVGAEDVPQVVEEAMPGLHKLKSIYDGKIEQALIDTYRRDYVGFGFPRWNKR
>Mature_476_residues
AGRFDAFVLFAEMRTGSNYLEDSLNTFADINCLGEVFNPTFIGHDNNFEMLGYDMDRREHDPLGLLDAIIDTVDGLPGFR
LFHDHDTRVVDRVLPDPRIAKVILTRNPLDSYVSRKIATATGQWKLTDMKHAKTAQIRFDADEFGALLDAVLPFQEYVRQ
GLLKSGQVAFQVRYEDINDPEMLNGLAAFLGSDERVERASKTLKRQNPAPLRDKVENYEEMVAALSDLDRFGLDKLPELE
PDRGAQVPNFVAHPTLGLLFCPIKGAPEKSVLNWMGALGDVGKDALIRKMTQKQLRQWMKDNPGFRSFTVLRHPVVRAYT
VFNRFILPDDRPAYADPRKTLRQRYKVPIPENAPGDGWTEAEQKAAFQGFIFFLKGNLAGQTSVRVDQAWATQTAILQGT
SSVMVPQAVIHEDHMTEALPALAHQVGAEDVPQVVEEAMPGLHKLKSIYDGKIEQALIDTYRRDYVGFGFPRWNKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53847; Mature: 53716

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGRFDAFVLFAEMRTGSNYLEDSLNTFADINCLGEVFNPTFIGHDNNFEMLGYDMDRRE
CCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCCCCCC
HDPLGLLDAIIDTVDGLPGFRLFHDHDTRVVDRVLPDPRIAKVILTRNPLDSYVSRKIAT
CCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHH
ATGQWKLTDMKHAKTAQIRFDADEFGALLDAVLPFQEYVRQGLLKSGQVAFQVRYEDIND
CCCCEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
PEMLNGLAAFLGSDERVERASKTLKRQNPAPLRDKVENYEEMVAALSDLDRFGLDKLPEL
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EPDRGAQVPNFVAHPTLGLLFCPIKGAPEKSVLNWMGALGDVGKDALIRKMTQKQLRQWM
CCCCCCCCCCCHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KDNPGFRSFTVLRHPVVRAYTVFNRFILPDDRPAYADPRKTLRQRYKVPIPENAPGDGWT
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
EAEQKAAFQGFIFFLKGNLAGQTSVRVDQAWATQTAILQGTSSVMVPQAVIHEDHMTEAL
HHHHHHHHHHEEEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHH
PALAHQVGAEDVPQVVEEAMPGLHKLKSIYDGKIEQALIDTYRRDYVGFGFPRWNKR
HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AGRFDAFVLFAEMRTGSNYLEDSLNTFADINCLGEVFNPTFIGHDNNFEMLGYDMDRRE
CCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCCCCCC
HDPLGLLDAIIDTVDGLPGFRLFHDHDTRVVDRVLPDPRIAKVILTRNPLDSYVSRKIAT
CCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCHHEEEEEECCCHHHHHHHHHHH
ATGQWKLTDMKHAKTAQIRFDADEFGALLDAVLPFQEYVRQGLLKSGQVAFQVRYEDIND
CCCCEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
PEMLNGLAAFLGSDERVERASKTLKRQNPAPLRDKVENYEEMVAALSDLDRFGLDKLPEL
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EPDRGAQVPNFVAHPTLGLLFCPIKGAPEKSVLNWMGALGDVGKDALIRKMTQKQLRQWM
CCCCCCCCCCCHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KDNPGFRSFTVLRHPVVRAYTVFNRFILPDDRPAYADPRKTLRQRYKVPIPENAPGDGWT
HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
EAEQKAAFQGFIFFLKGNLAGQTSVRVDQAWATQTAILQGTSSVMVPQAVIHEDHMTEAL
HHHHHHHHHHEEEEEECCCCCCCCEEEHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHH
PALAHQVGAEDVPQVVEEAMPGLHKLKSIYDGKIEQALIDTYRRDYVGFGFPRWNKR
HHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA