Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052660

Identifier: 89052660

GI number: 89052660

Start: 161925

End: 162314

Strand: Direct

Name: 89052660

Synonym: Jann_0169

Alternate gene names: NA

Gene position: 161925-162314 (Clockwise)

Preceding gene: 89052659

Following gene: 89052674

Centisome position: 3.75

GC content: 54.36

Gene sequence:

>390_bases
ATGCGGGTTGTCTTCATTTCTTTGGTTTTGTCTTTCACGATCCCGTTCGCCGCCCACGCACAGCAGTTGATTGCCAGCTA
CTACACGACATTGGGACCAAATGATCACTACAACAGTTCTGGCACGCGCCTTGGGGATTTCGGGGCCATCTTGCAGCAGG
ACCGTGCCAACGTGCATCGCTTTGGGATCTACGATTCCGGCGATCAAAGTGATCCGATCTTCGGGAGTCTGCAAAATCGC
AGCCTTATCCCGTCAATCTGGCGATTTGGGCCCAGCGCACAGGGCATCCCGAACCGGGTCGTTCAAGGGCATCAGGCTTA
TATCTTTGTCGAGATTTTTGGCTTCGGTGGAACGCCTCAAATCATCGTCGTTCACCAGGGTGCCGGGTGA

Upstream 100 bases:

>100_bases
ACGCCGACATTATTTTTGAAAGCGCGACAGACGCATAGGGTGTTCCGAAATGGGCCATGTCTGCTAGCCTCCTGACAGTT
GATATGTTCAGGAGAGTACG

Downstream 100 bases:

>100_bases
TCACGCCCGCGCGGCCAGAACCTCAACACCCATCGCCTCTAGTGCAGCTTGGGCGATGTCATCGGCGGTCAGGCCCGCAT
CTGCATACATCTCGGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRVVFISLVLSFTIPFAAHAQQLIASYYTTLGPNDHYNSSGTRLGDFGAILQQDRANVHRFGIYDSGDQSDPIFGSLQNR
SLIPSIWRFGPSAQGIPNRVVQGHQAYIFVEIFGFGGTPQIIVVHQGAG

Sequences:

>Translated_129_residues
MRVVFISLVLSFTIPFAAHAQQLIASYYTTLGPNDHYNSSGTRLGDFGAILQQDRANVHRFGIYDSGDQSDPIFGSLQNR
SLIPSIWRFGPSAQGIPNRVVQGHQAYIFVEIFGFGGTPQIIVVHQGAG
>Mature_129_residues
MRVVFISLVLSFTIPFAAHAQQLIASYYTTLGPNDHYNSSGTRLGDFGAILQQDRANVHRFGIYDSGDQSDPIFGSLQNR
SLIPSIWRFGPSAQGIPNRVVQGHQAYIFVEIFGFGGTPQIIVVHQGAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14109; Mature: 14109

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVFISLVLSFTIPFAAHAQQLIASYYTTLGPNDHYNSSGTRLGDFGAILQQDRANVHR
CEEEHEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEE
FGIYDSGDQSDPIFGSLQNRSLIPSIWRFGPSAQGIPNRVVQGHQAYIFVEIFGFGGTPQ
ECCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCE
IIVVHQGAG
EEEEECCCC
>Mature Secondary Structure
MRVVFISLVLSFTIPFAAHAQQLIASYYTTLGPNDHYNSSGTRLGDFGAILQQDRANVHR
CEEEHEEHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEE
FGIYDSGDQSDPIFGSLQNRSLIPSIWRFGPSAQGIPNRVVQGHQAYIFVEIFGFGGTPQ
ECCCCCCCCCCCCEECCCCCCCCCHHHHCCCCCCCCCHHHCCCCCEEEEEEEECCCCCCE
IIVVHQGAG
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA