| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052630
Identifier: 89052630
GI number: 89052630
Start: 129615
End: 130661
Strand: Reverse
Name: 89052630
Synonym: Jann_0139
Alternate gene names: NA
Gene position: 130661-129615 (Counterclockwise)
Preceding gene: 89052633
Following gene: 89052628
Centisome position: 3.03
GC content: 65.81
Gene sequence:
>1047_bases ATGACCGATATCACTGGGCCCGACATCATTGTCCGGGGGGCGGGGATCACCGGGCTGATGTGTGCCTGGATGCTGGTCCG GCGTGGCGCGAAGGTGCAGGTCGTTGACCCCAAGGGTGTCGGCGCTGGCGCGTCAGGTGGGATCGTCGGCGCGCTGGCGC CCCATGTTCCCGAAAACTGGAATGCCAAGAAAGCGATGCAGTTCAAAGCCTTGCATGAGGCGGGGGCGCTTTGGGCCGAG GTGGCCGATGCCGGCGGACAGGAGCCCGGTTACGCGCGGACGGGACGCGTCCAGCCGCTGTCGGACGCAGCCGCCGTGGC GCTGGCCCGGCAGCGGACCGAGACGGCGAAGGACCTGTGGGAGACGCGCTATCAATGGCGTGTGATCCCTGCGGATGACG TCGACGTTGCCGTGGAAAGCCCAACCGGGCTTGTTATTCACGATACGTTGACCGCGCGTATTCATCCCCGACGGGCCTGT GCCGCGCTCGCCTCTGCCCTCCGCGCATTGGGGGTCGAGATCCGGCCCGAGGCCACCTGCGCGGGCGTTGAGGTTTGGGC GACCGGTGCCGATGATCTGATCCAGATGTCCAAGGCGCGGGGCAAGTTGGTGGGCGCGCCGATCAAAGGACAAGCTGCGC TGTTGCGGGCTGATCTGCGGGAGGCTCCACAGGTCTTTGTGGATGGGTTGCACATCGTACCCCACGGCGACGGGACAGTG GCGATCGGATCGACGACGGAGCGGGAGTTTGAGGATGCCACCAGCACCGATGCGCAGCTTGACCCGTTGATCAAGGCTGC CCGGCAAGCGGTGCCTGCCCTGCGCGATGCGCCTGTGACCCAACGGTGGGCGGGGTTGCGACCGCGGGCCAAAAGCCGTG CGCCGATGGTTGGCCCCCACCCGATGCGAAAAGGCGCGTATATCGCCAATGGGGGCTTCAAGATTGGCCTCGCGATGGCC CCCGTGATGGCAGAGATGTTGGCCGCGCTGATCTTGGATGAAACAGACACTATTCCGCAGGATTTCCGCCCTGAGGCCAG CTTCTAG
Upstream 100 bases:
>100_bases TCGGGACACCGCCACGCCAATCGATCTTTGTCTGGTCCTTGCTCATCTCGCGCCCTATCCCTTGCGGGGCGGACGATCTG ACAAGCCTGACGGAGTTGCA
Downstream 100 bases:
>100_bases AGCCCCGCCGCGCGCCGCAATTCTTCCATAAGGCCGTTCAGCGCCTTGCGGTTCATCTCATTCGTCAGGTGCCCATCTTC GAACGCCGAAAACGCGCTGC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTDITGPDIIVRGAGITGLMCAWMLVRRGAKVQVVDPKGVGAGASGGIVGALAPHVPENWNAKKAMQFKALHEAGALWAE VADAGGQEPGYARTGRVQPLSDAAAVALARQRTETAKDLWETRYQWRVIPADDVDVAVESPTGLVIHDTLTARIHPRRAC AALASALRALGVEIRPEATCAGVEVWATGADDLIQMSKARGKLVGAPIKGQAALLRADLREAPQVFVDGLHIVPHGDGTV AIGSTTEREFEDATSTDAQLDPLIKAARQAVPALRDAPVTQRWAGLRPRAKSRAPMVGPHPMRKGAYIANGGFKIGLAMA PVMAEMLAALILDETDTIPQDFRPEASF
Sequences:
>Translated_348_residues MTDITGPDIIVRGAGITGLMCAWMLVRRGAKVQVVDPKGVGAGASGGIVGALAPHVPENWNAKKAMQFKALHEAGALWAE VADAGGQEPGYARTGRVQPLSDAAAVALARQRTETAKDLWETRYQWRVIPADDVDVAVESPTGLVIHDTLTARIHPRRAC AALASALRALGVEIRPEATCAGVEVWATGADDLIQMSKARGKLVGAPIKGQAALLRADLREAPQVFVDGLHIVPHGDGTV AIGSTTEREFEDATSTDAQLDPLIKAARQAVPALRDAPVTQRWAGLRPRAKSRAPMVGPHPMRKGAYIANGGFKIGLAMA PVMAEMLAALILDETDTIPQDFRPEASF >Mature_347_residues TDITGPDIIVRGAGITGLMCAWMLVRRGAKVQVVDPKGVGAGASGGIVGALAPHVPENWNAKKAMQFKALHEAGALWAEV ADAGGQEPGYARTGRVQPLSDAAAVALARQRTETAKDLWETRYQWRVIPADDVDVAVESPTGLVIHDTLTARIHPRRACA ALASALRALGVEIRPEATCAGVEVWATGADDLIQMSKARGKLVGAPIKGQAALLRADLREAPQVFVDGLHIVPHGDGTVA IGSTTEREFEDATSTDAQLDPLIKAARQAVPALRDAPVTQRWAGLRPRAKSRAPMVGPHPMRKGAYIANGGFKIGLAMAP VMAEMLAALILDETDTIPQDFRPEASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DadA oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 - InterPro: IPR012727 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: NA
Molecular weight: Translated: 36793; Mature: 36661
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDITGPDIIVRGAGITGLMCAWMLVRRGAKVQVVDPKGVGAGASGGIVGALAPHVPENW CCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCC NAKKAMQFKALHEAGALWAEVADAGGQEPGYARTGRVQPLSDAAAVALARQRTETAKDLW CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ETRYQWRVIPADDVDVAVESPTGLVIHDTLTARIHPRRACAALASALRALGVEIRPEATC HCCCEEEEECCCCCEEEEECCCCEEEECCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCC AGVEVWATGADDLIQMSKARGKLVGAPIKGQAALLRADLREAPQVFVDGLHIVPHGDGTV CCEEEEECCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCE AIGSTTEREFEDATSTDAQLDPLIKAARQAVPALRDAPVTQRWAGLRPRAKSRAPMVGPH EECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC PMRKGAYIANGGFKIGLAMAPVMAEMLAALILDETDTIPQDFRPEASF CCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TDITGPDIIVRGAGITGLMCAWMLVRRGAKVQVVDPKGVGAGASGGIVGALAPHVPENW CCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCC NAKKAMQFKALHEAGALWAEVADAGGQEPGYARTGRVQPLSDAAAVALARQRTETAKDLW CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ETRYQWRVIPADDVDVAVESPTGLVIHDTLTARIHPRRACAALASALRALGVEIRPEATC HCCCEEEEECCCCCEEEEECCCCEEEECCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCC AGVEVWATGADDLIQMSKARGKLVGAPIKGQAALLRADLREAPQVFVDGLHIVPHGDGTV CCEEEEECCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCE AIGSTTEREFEDATSTDAQLDPLIKAARQAVPALRDAPVTQRWAGLRPRAKSRAPMVGPH EECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC PMRKGAYIANGGFKIGLAMAPVMAEMLAALILDETDTIPQDFRPEASF CCCCCCEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8682785; 10984043; 8097014 [H]