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The map label for this gene is crtB [H]

Identifier: 89052633

GI number: 89052633

Start: 132239

End: 133252

Strand: Reverse

Name: crtB [H]

Synonym: Jann_0142

Alternate gene names: 89052633

Gene position: 133252-132239 (Counterclockwise)

Preceding gene: 89052634

Following gene: 89052630

Centisome position: 3.09

GC content: 62.72

Gene sequence:

>1014_bases
ATGATCGACCCCGATGATATGGACCATTGTCGTCATGCGATCCGCGAAGGGTCGTATTCCTTCCACGCGGCATCGAAACT
TCTGCCGTCTTCCGTGCGCGATCCGGCCCTTGCGCTTTATGCGTTTTGCCGCTTGGCGGATGATGAGGTCGACTTTGGCG
CGGACAAACCAGCAGCCGTTCTGGCGCTCTCAGAGCGTCTCGAACATGCCTATCAGGGTCGCCCTCGAAACCATCCGACA
GATCGCGCCTTCACTGCAATGATTGAAGAATTCGATATGCCGCGCGCCTTGCCGGAGGCGTTGTTGGAGGGCCTCGCCTG
GGACGGGATGGAGCGGCGCTATGCCACGCTGTCTGATCTGCGCAGCTATTCGGCGCGTGTTGCGTCCGCCGTTGGCGCAA
TGATGTGCGTGCTGATGCGGGTCCGTGATGAACAGGCCTTGGCGCGCGCCTGCGATCTGGGCGTCGCCATGCAGCTGACC
AATATCGCCCGTGATGTCGGCGAAGACGCGGCGGAACGGCGACTGTACCTGCCCACCGATTGGCTGGAGGAGGAAGGCAT
TGATATCGAGCGTCTTTTCACCAGTCCCGTGTCGTCCCCGCGTCTCAAACGGCTGACAAAACGGCTGTTGGCGGAGGCGC
ACAAGCTCTATCTCAAGTCCGAGCCCGGGATTGGCCGTCTGCCCCTTGCCGCACGTCCCGGCATCTTCGCCGCGCGCCAT
TGTTATGACGCCATAGGGCGCAACCTCGCGCAGCACGGATATGACAACGTCAACCGGCGCGCCACCACGACGGGGGGTCA
CAAGATGCGGCTTCTGGGTCTGTCGATTGTGCGCGCGGGCCTTGCCAGCATCCTGCCGGAAAGCCCGGTGATCTTCGCTC
GACCCCTGCCTGAGACGGCGTTTCTGGTCGAGGCCGCAGCCCACCCCGCGCCCAACAAGGACGCGTGGAGCGATCCGTTG
CTGTCTGTCCTGTCTCAGCTGAAAGCGCAAGACCGCCCCCACGCGGCAGAATGA

Upstream 100 bases:

>100_bases
TTCCGTCCGTTGTGACCTCGTCTGAGGTTCTCAACAAACTGGTGCCCGCCGCAGAGACGCCAGTTATCCCCCCCATTCAG
CGGGTGGCGGCGGAGTGAGC

Downstream 100 bases:

>100_bases
TCAGCCCCCCGTCACGGTGCGTGTGCGCCAGAGCGTGAACAGCCCGGCACAGATCACGATCGCCGCCCCGATGGCCACGT
TTGTCGCCAAGACCTCGCCG

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MIDPDDMDHCRHAIREGSYSFHAASKLLPSSVRDPALALYAFCRLADDEVDFGADKPAAVLALSERLEHAYQGRPRNHPT
DRAFTAMIEEFDMPRALPEALLEGLAWDGMERRYATLSDLRSYSARVASAVGAMMCVLMRVRDEQALARACDLGVAMQLT
NIARDVGEDAAERRLYLPTDWLEEEGIDIERLFTSPVSSPRLKRLTKRLLAEAHKLYLKSEPGIGRLPLAARPGIFAARH
CYDAIGRNLAQHGYDNVNRRATTTGGHKMRLLGLSIVRAGLASILPESPVIFARPLPETAFLVEAAAHPAPNKDAWSDPL
LSVLSQLKAQDRPHAAE

Sequences:

>Translated_337_residues
MIDPDDMDHCRHAIREGSYSFHAASKLLPSSVRDPALALYAFCRLADDEVDFGADKPAAVLALSERLEHAYQGRPRNHPT
DRAFTAMIEEFDMPRALPEALLEGLAWDGMERRYATLSDLRSYSARVASAVGAMMCVLMRVRDEQALARACDLGVAMQLT
NIARDVGEDAAERRLYLPTDWLEEEGIDIERLFTSPVSSPRLKRLTKRLLAEAHKLYLKSEPGIGRLPLAARPGIFAARH
CYDAIGRNLAQHGYDNVNRRATTTGGHKMRLLGLSIVRAGLASILPESPVIFARPLPETAFLVEAAAHPAPNKDAWSDPL
LSVLSQLKAQDRPHAAE
>Mature_337_residues
MIDPDDMDHCRHAIREGSYSFHAASKLLPSSVRDPALALYAFCRLADDEVDFGADKPAAVLALSERLEHAYQGRPRNHPT
DRAFTAMIEEFDMPRALPEALLEGLAWDGMERRYATLSDLRSYSARVASAVGAMMCVLMRVRDEQALARACDLGVAMQLT
NIARDVGEDAAERRLYLPTDWLEEEGIDIERLFTSPVSSPRLKRLTKRLLAEAHKLYLKSEPGIGRLPLAARPGIFAARH
CYDAIGRNLAQHGYDNVNRRATTTGGHKMRLLGLSIVRAGLASILPESPVIFARPLPETAFLVEAAAHPAPNKDAWSDPL
LSVLSQLKAQDRPHAAE

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 37239; Mature: 37239

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPDDMDHCRHAIREGSYSFHAASKLLPSSVRDPALALYAFCRLADDEVDFGADKPAAV
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHH
LALSERLEHAYQGRPRNHPTDRAFTAMIEEFDMPRALPEALLEGLAWDGMERRYATLSDL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
RSYSARVASAVGAMMCVLMRVRDEQALARACDLGVAMQLTNIARDVGEDAAERRLYLPTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCH
WLEEEGIDIERLFTSPVSSPRLKRLTKRLLAEAHKLYLKSEPGIGRLPLAARPGIFAARH
HHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
CYDAIGRNLAQHGYDNVNRRATTTGGHKMRLLGLSIVRAGLASILPESPVIFARPLPETA
HHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH
FLVEAAAHPAPNKDAWSDPLLSVLSQLKAQDRPHAAE
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIDPDDMDHCRHAIREGSYSFHAASKLLPSSVRDPALALYAFCRLADDEVDFGADKPAAV
CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHH
LALSERLEHAYQGRPRNHPTDRAFTAMIEEFDMPRALPEALLEGLAWDGMERRYATLSDL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
RSYSARVASAVGAMMCVLMRVRDEQALARACDLGVAMQLTNIARDVGEDAAERRLYLPTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCH
WLEEEGIDIERLFTSPVSSPRLKRLTKRLLAEAHKLYLKSEPGIGRLPLAARPGIFAARH
HHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
CYDAIGRNLAQHGYDNVNRRATTTGGHKMRLLGLSIVRAGLASILPESPVIFARPLPETA
HHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH
FLVEAAAHPAPNKDAWSDPLLSVLSQLKAQDRPHAAE
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8021167; 7721699; 10648776 [H]