| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sam [H]
Identifier: 89052622
GI number: 89052622
Start: 120005
End: 120970
Strand: Direct
Name: sam [H]
Synonym: Jann_0131
Alternate gene names: 89052622
Gene position: 120005-120970 (Clockwise)
Preceding gene: 89052621
Following gene: 89052623
Centisome position: 2.78
GC content: 62.22
Gene sequence:
>966_bases GTGACACCGAACATACGTGGCGCGCTTTTAGGCCTGTTGGCGTTTGGGATCTTTTCCACTCACGACATCATCGTGAAGTA TCTGGGCGGAACCTATGCGCCGTTTCAGATCGTGTTCTTCTCGGTCCTGTTTGGCTTTCCCATCGTGACCTTCCTGCTTC TGCGCGACGCCACAGAGGCAAACCTGCGGCCCAAACATCCATGGTGGATCGCCGCGCGGTCTCTGGCATCTGTCACTGTG GGCATCTGTGCGTTCTACGCCTTCACGGTGCTGCCGCTGGCCCAGGTCTATGCGATCATCTTTGCAGCACCCCTACTGAT CACGGTCCTTGCAATCCCGATGTTGGGCGAGACCGTGGGCTGGCGGCGCGGGTTGGCTGTTGTCGTGGGACTTGTCGGGG TTGTGGTCGTGCTACAACCCGGCAGCACCACGCTTTCACTTGGCCACGGCGCGGCCCTTCTGGCGGCAGTGGGCGGGGCG ATTGCATCGCTCATCATGCGCAAGGTCGGACGGGAAGAACGCTCCGTCGTGATGCTGCTTTACCCGATGAGTGCGAACTT CGTGCTGATGGGTGCCGCGTTGCCGTTCTATTATCAACCCATGCCGGGACAGGATCTGGCAGCACTCGCCGTCATCTCGG CCCTCGCACTGACCGCCAGCGCCTGCCTGATCTTCGCCTATCGCGCCGCCCCGGCCGTTCTGGTCGCCCCCATGCAATAC AGTCAGATCCTTTGGGCAGCTGTCTTCGGCTTCCTGCTGTTTGACGAAGGGCTGGACGCACCCATCCTCATCGGGTCGGC CATCATCATCGCGTCGGGCATCTACATCGTGCTGCGGGAAGATCGTGGCGGCACATCCTCGACCACGCCGGTGTTGCGCA CCCGGACCCGTGTGGGCACCCCCAGCGGGCTACGCATCGCGCCCTTCCTGAAAAATGAACGGCGCGGGCCGCCACCGTCC ACCTGA
Upstream 100 bases:
>100_bases TGTGGGCGCGGCGCGAATACTGTGACCTGGCAAACAAACCTGTGCCCGTAACCGCCCGCATCGCCTGCGCGGGCATATGG TTTGATGGAAAGGATACCCC
Downstream 100 bases:
>100_bases TCCCACTTGCCAAGGCCCCCCGCCGCCGCTATCCCGCGAGGCACGGTCGGGCTGTGGCGCAGCCTGGTAGCGCACCTGCT TCGGGAGCAGGGGGTCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTPNIRGALLGLLAFGIFSTHDIIVKYLGGTYAPFQIVFFSVLFGFPIVTFLLLRDATEANLRPKHPWWIAARSLASVTV GICAFYAFTVLPLAQVYAIIFAAPLLITVLAIPMLGETVGWRRGLAVVVGLVGVVVVLQPGSTTLSLGHGAALLAAVGGA IASLIMRKVGREERSVVMLLYPMSANFVLMGAALPFYYQPMPGQDLAALAVISALALTASACLIFAYRAAPAVLVAPMQY SQILWAAVFGFLLFDEGLDAPILIGSAIIIASGIYIVLREDRGGTSSTTPVLRTRTRVGTPSGLRIAPFLKNERRGPPPS T
Sequences:
>Translated_321_residues MTPNIRGALLGLLAFGIFSTHDIIVKYLGGTYAPFQIVFFSVLFGFPIVTFLLLRDATEANLRPKHPWWIAARSLASVTV GICAFYAFTVLPLAQVYAIIFAAPLLITVLAIPMLGETVGWRRGLAVVVGLVGVVVVLQPGSTTLSLGHGAALLAAVGGA IASLIMRKVGREERSVVMLLYPMSANFVLMGAALPFYYQPMPGQDLAALAVISALALTASACLIFAYRAAPAVLVAPMQY SQILWAAVFGFLLFDEGLDAPILIGSAIIIASGIYIVLREDRGGTSSTTPVLRTRTRVGTPSGLRIAPFLKNERRGPPPS T >Mature_320_residues TPNIRGALLGLLAFGIFSTHDIIVKYLGGTYAPFQIVFFSVLFGFPIVTFLLLRDATEANLRPKHPWWIAARSLASVTVG ICAFYAFTVLPLAQVYAIIFAAPLLITVLAIPMLGETVGWRRGLAVVVGLVGVVVVLQPGSTTLSLGHGAALLAAVGGAI ASLIMRKVGREERSVVMLLYPMSANFVLMGAALPFYYQPMPGQDLAALAVISALALTASACLIFAYRAAPAVLVAPMQYS QILWAAVFGFLLFDEGLDAPILIGSAIIIASGIYIVLREDRGGTSSTTPVLRTRTRVGTPSGLRIAPFLKNERRGPPPST
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34101; Mature: 33970
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPNIRGALLGLLAFGIFSTHDIIVKYLGGTYAPFQIVFFSVLFGFPIVTFLLLRDATEA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NLRPKHPWWIAARSLASVTVGICAFYAFTVLPLAQVYAIIFAAPLLITVLAIPMLGETVG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRRGLAVVVGLVGVVVVLQPGSTTLSLGHGAALLAAVGGAIASLIMRKVGREERSVVMLL HHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE YPMSANFVLMGAALPFYYQPMPGQDLAALAVISALALTASACLIFAYRAAPAVLVAPMQY EECCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHH SQILWAAVFGFLLFDEGLDAPILIGSAIIIASGIYIVLREDRGGTSSTTPVLRTRTRVGT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCC PSGLRIAPFLKNERRGPPPST CCCCEEECCHHCCCCCCCCCC >Mature Secondary Structure TPNIRGALLGLLAFGIFSTHDIIVKYLGGTYAPFQIVFFSVLFGFPIVTFLLLRDATEA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC NLRPKHPWWIAARSLASVTVGICAFYAFTVLPLAQVYAIIFAAPLLITVLAIPMLGETVG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WRRGLAVVVGLVGVVVVLQPGSTTLSLGHGAALLAAVGGAIASLIMRKVGREERSVVMLL HHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE YPMSANFVLMGAALPFYYQPMPGQDLAALAVISALALTASACLIFAYRAAPAVLVAPMQY EECCCCEEEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHH SQILWAAVFGFLLFDEGLDAPILIGSAIIIASGIYIVLREDRGGTSSTTPVLRTRTRVGT HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCCCC PSGLRIAPFLKNERRGPPPST CCCCEEECCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA