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The map label for this gene is omp-1Z [H]

Identifier: 88658596

GI number: 88658596

Start: 1155859

End: 1156761

Strand: Direct

Name: omp-1Z [H]

Synonym: ECH_1134

Alternate gene names: 88658596

Gene position: 1155859-1156761 (Clockwise)

Preceding gene: 88657728

Following gene: 88657772

Centisome position: 98.27

GC content: 32.78

Gene sequence:

>903_bases
ATGAAGAAGAAAAATCAATTTATCACAATAAGTACAATATTAGTATGTTTATTGTCATTATCTAATGCATCACTTTCAAA
CACTACAAATAGCAGCACTAAAAAACAGTTTGGGTTATATGTTAGTGGACAATACAAGCCTAGTGTTTCTATTTTTAGCA
ATTTCTCAGTAAAGGAAACTAATTTTCCTACAAAGTATCTAGCAGCTCTTAAAAAAGACATTAATTCTGTCGAATTTGAC
GATAGTGTTACTGCTGGCATTAGTTACCCACTTAATTTCAGTACTCCTTATATAGCTGTATTTCAAGATAATATTTCTAA
TTTTAATGGCGCTATTGGGTACACTTTTGTTGAAGGCCCAAGAATTGAAATAGAAGGTTCTTATGAAGAATTCGATGTCA
AAGACCCTGGAAGATATACAGAAATACAAGATGCATACCGTTACTTTGCTTTAGCACGTGATATAGACTCTATTCCTACT
AGCCCAAAAAATAGAACTTCACATGATGGCAACAGTTCATATAAGGTATACCACACTGTAATGAAAAATGAAGGACTATC
TATAATATCCATTATGGTCAATGGCTGCTATGATTTTTCTTCAGATAATTTATCAATATTACCTTATGTATGTGGTGGTA
TAGGTGTAAATGCTATAGAGTTTTTCGATGCATTACATGTTAAATTCGCGTGTCAGGGTAAATTAGGTATTACTTATCCA
TTATCTTCCAACGTTAGTTTATTTGCTGGTGGATATTATCACCAAGTAATGGGCAACCAATTTAAAAATCTAAATGTTCA
ACATGTAGCTGAACTTAATGACGCACCCAAAGTTACATCTGCAGTAGCTACACTTGACATTGGGTATTTTGGTGGTGAAA
TTGGAGCAAGGCTTATATTTTAA

Upstream 100 bases:

>100_bases
TAAAGTTACATCTGCTGTTGCTACACTTGATATTGGGTATTTTGGTGGTGAAGTTGGAGTAAGGTTTATACTTTAATTAT
AACTAAACACGGAAAATTTC

Downstream 100 bases:

>100_bases
TTATAAACAAATATGGAAAATCTCATGAATAAGAAAAACAAATTCTTTACAATAAGTACAGCAATGGTATGCTTATTGTT
ATTACCTGGTATATCATTTT

Product: major outer membrane protein OMP-1Z

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKKKNQFITISTILVCLLSLSNASLSNTTNSSTKKQFGLYVSGQYKPSVSIFSNFSVKETNFPTKYLAALKKDINSVEFD
DSVTAGISYPLNFSTPYIAVFQDNISNFNGAIGYTFVEGPRIEIEGSYEEFDVKDPGRYTEIQDAYRYFALARDIDSIPT
SPKNRTSHDGNSSYKVYHTVMKNEGLSIISIMVNGCYDFSSDNLSILPYVCGGIGVNAIEFFDALHVKFACQGKLGITYP
LSSNVSLFAGGYYHQVMGNQFKNLNVQHVAELNDAPKVTSAVATLDIGYFGGEIGARLIF

Sequences:

>Translated_300_residues
MKKKNQFITISTILVCLLSLSNASLSNTTNSSTKKQFGLYVSGQYKPSVSIFSNFSVKETNFPTKYLAALKKDINSVEFD
DSVTAGISYPLNFSTPYIAVFQDNISNFNGAIGYTFVEGPRIEIEGSYEEFDVKDPGRYTEIQDAYRYFALARDIDSIPT
SPKNRTSHDGNSSYKVYHTVMKNEGLSIISIMVNGCYDFSSDNLSILPYVCGGIGVNAIEFFDALHVKFACQGKLGITYP
LSSNVSLFAGGYYHQVMGNQFKNLNVQHVAELNDAPKVTSAVATLDIGYFGGEIGARLIF
>Mature_300_residues
MKKKNQFITISTILVCLLSLSNASLSNTTNSSTKKQFGLYVSGQYKPSVSIFSNFSVKETNFPTKYLAALKKDINSVEFD
DSVTAGISYPLNFSTPYIAVFQDNISNFNGAIGYTFVEGPRIEIEGSYEEFDVKDPGRYTEIQDAYRYFALARDIDSIPT
SPKNRTSHDGNSSYKVYHTVMKNEGLSIISIMVNGCYDFSSDNLSILPYVCGGIGVNAIEFFDALHVKFACQGKLGITYP
LSSNVSLFAGGYYHQVMGNQFKNLNVQHVAELNDAPKVTSAVATLDIGYFGGEIGARLIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 33045; Mature: 33045

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKNQFITISTILVCLLSLSNASLSNTTNSSTKKQFGLYVSGQYKPSVSIFSNFSVKET
CCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEECCCCCCEEEEECCEEECC
NFPTKYLAALKKDINSVEFDDSVTAGISYPLNFSTPYIAVFQDNISNFNGAIGYTFVEGP
CCCHHHHHHHHHHCCCCCCCCCEEECEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCC
RIEIEGSYEEFDVKDPGRYTEIQDAYRYFALARDIDSIPTSPKNRTSHDGNSSYKVYHTV
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE
MKNEGLSIISIMVNGCYDFSSDNLSILPYVCGGIGVNAIEFFDALHVKFACQGKLGITYP
ECCCCCEEEEEEEECCEECCCCCEEEEEEECCCCCCHHHHHHHHHEEEEEECCCCEEEEE
LSSNVSLFAGGYYHQVMGNQFKNLNVQHVAELNDAPKVTSAVATLDIGYFGGEIGARLIF
CCCCCEEEECCCHHHHHCCHHHCCCHHHHHHCCCCCHHHHHHHEEEEECCCCCCCCEECC
>Mature Secondary Structure
MKKKNQFITISTILVCLLSLSNASLSNTTNSSTKKQFGLYVSGQYKPSVSIFSNFSVKET
CCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEECCCCCCEEEEECCEEECC
NFPTKYLAALKKDINSVEFDDSVTAGISYPLNFSTPYIAVFQDNISNFNGAIGYTFVEGP
CCCHHHHHHHHHHCCCCCCCCCEEECEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCC
RIEIEGSYEEFDVKDPGRYTEIQDAYRYFALARDIDSIPTSPKNRTSHDGNSSYKVYHTV
EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE
MKNEGLSIISIMVNGCYDFSSDNLSILPYVCGGIGVNAIEFFDALHVKFACQGKLGITYP
ECCCCCEEEEEEEECCEECCCCCEEEEEEECCCCCCHHHHHHHHHEEEEEECCCCEEEEE
LSSNVSLFAGGYYHQVMGNQFKNLNVQHVAELNDAPKVTSAVATLDIGYFGGEIGARLIF
CCCCCEEEECCCHHHHHCCHHHCCCHHHHHHCCCCCHHHHHHHEEEEECCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]